Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00432 ATGTCCATTTCAATGAGCTGCTTTTGCTTGATGAAAAGCAGCAGACCAAAAATTAAGCGAGAACCATTCTCCTTTCTTGCTTTGGAGACATCTTTTACTGTTAATGAGGTTGAGGCTTTACTTTACTTGTTTAAGAAACTTAGCAGTTCAATTGTTGATGATGGCTGCATTCACAAGGAGGAGTTTCAACTTGCACTTTTTAGAAATAGCAGCAAGCAAAATCTACTTGCAAACAGGGTATTTGATATGTTTGATATTAAGTGTAACGGAGTAATTGAATTTGGTGAATTCGTTCGGTCGCTAAGCATCTTTCATCCAAAGGCATCTGAAGAGAAGAAAATTGAATTTGCATTTAAATTGTTTGATCTTGGAAAGAATGGATACATTGAACATTGTGAGGTGAAGGAAATGGTCTTGGCTACTTTGACTGAATCAGAAGTTACAATTccagatgatattgttgaatccattgtagaaaagACAATGAAGGAGGTTGACTCAAAGGGAGATGGGAAGATTGATATGGAAGAGTGGAAAGAGTATGCAGAAAAAAATCCTTCTCTTCTTAAGATCATGACCCTTCCATATCTAAAGGACATAACTCTAGCATTTCCCAGCTTTGTTTTGCATACTGAGGTGGAAGACTAG 648 0.3503 MSISMSCFCLMKSSRPKIKREPFSFLALETSFTVNEVEALLYLFKKLSSSIVDDGCIHKEEFQLALFRNSSKQNLLANRVFDMFDIKCNGVIEFGEFVRSLSIFHPKASEEKKIEFAFKLFDLGKNGYIEHCEVKEMVLATLTESEVTIPDDIVESIVEKTMKEVDSKGDGKIDMEEWKEYAEKNPSLLKIMTLPYLKDITLAFPSFVLHTEVED 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00432 215 ProSiteProfiles EF-hand calcium-binding domain profile. 72 107 IPR002048 GO:0005509
Car06g00432 215 Pfam EF-hand domain pair 111 181 IPR002048 GO:0005509
Car06g00432 215 ProSiteProfiles EF-hand calcium-binding domain profile. 153 188 IPR002048 GO:0005509
Car06g00432 215 ProSiteProfiles EF-hand calcium-binding domain profile. 109 144 IPR002048 GO:0005509
Car06g00432 215 PANTHER CALCINEURIN B 5 214 IPR045198 GO:0005509|GO:0019722|GO:0019900
Car06g00432 215 CDD EFh 113 180 IPR002048 GO:0005509
Car06g00432 215 Pfam EF-hand domain pair 54 99 IPR002048 GO:0005509
Car06g00432 215 SUPERFAMILY EF-hand 25 207 IPR011992 -
Car06g00432 215 SMART efh_1 76 104 IPR002048 GO:0005509
Car06g00432 215 SMART efh_1 113 141 IPR002048 GO:0005509
Car06g00432 215 SMART efh_1 157 185 IPR002048 GO:0005509
Car06g00432 215 Gene3D - 25 215 - -
Car06g00432 215 PRINTS Recoverin family signature 18 32 - -
Car06g00432 215 PRINTS Recoverin family signature 80 101 - -
Car06g00432 215 PRINTS Recoverin family signature 127 145 - -
Car06g00432 215 PRINTS Recoverin family signature 173 193 - -
Car06g00432 215 PANTHER CALCINEURIN B-LIKE PROTEIN 8 5 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00432 Car-Chr6 4452324 4455414 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00432 5 215 EF-hand Containing Proteins AT4G17615 55.924 2.71e-83 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00432 K06268 - vra:106766823 291.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00432 06 4452324 4455414 Car06g00432 06 4452324 4455414 ECH