Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00414 atggcgatctcatcacaatccttctcaatctctttcatctcaactcgtaatgatttgactcatccaactcGCCCACTCTCCCGAGTCACTTTCACTCACTTCCGCAAAACTCTAACTCGCTCTTCAACTCGTCGTTTCGTCGTCACTTCACGTCTCAACTCTTCCAAATCCCCCGATGCCGGCGGCTCCTTCTCGCCGGACAACGGCGACGTCCCCTACGAGCTTCACCACGATCTTTCTCCGCAGCGTCGTAGGCGTGGATCGCCGGTGTTCGTGACGCTTCCGGTGAAATCCGTTGGTTCGGAGGGAAAGATTTGGAGGCCGAAAGCGATGATGTTGTCGCTTAAGGCACTTGCTTCTGCGGGTGTGGAGGGTGTTGTTGTTGAGATTTGGTGGGGTGTGGTTGAAAGGAATGAGCCTAGGGTTTATGATTGGCGAGGGTATCGTGAACTTGTTGTTATGGCTTGTATGTGTGGGCTTAAGGTTCGAGCTGTTCTTGCGTTTCATCAACACGGTACGGAGCCTGATGATCCTAATTGGATACCACTTCCTCGATGGGTGCTTGATGAGATAGATAAAGATCCGGATTTAGCATTTTCTGATAGGTTTGGAAGAAAAAATATGGAATACATTTCCCTCGGGTGTGATATTCTTCCCGTGCTGCGTGGACGCTCTCCCATTCAAGCATATGCAGATTTTATGAGGGACTTCAGGGACACTTTTAGGCCTTTTCTTGGCGTGATCATTACAGGAGTGCAGATTGGCATGGGTCCTGGTGGTGAATTGAGATATCCTTCATTGTCTTCCCAAAAGCTTAATTTGGCTCGGTCTCGTGAACTTGGAGAGTTTCAGTGCTATGATAAGTATATGCTTGCTTCTCTGAATGCCTCTGCAAGAAATATTGGAAAGCGTGAATGGGGAAATGGTGGTCCATTTGGCACTGGAAGTTTGATGCAAAATCCCGAGCGCACTGAATTCTTTAGAAACGAGGGTGGCTCTTGGAACATGCCATATGGTAAATTTTTCCTTGAATGGTACTCAGATATGCTGCTATTGCATGGAGAGAGAATATGTAGGGAAGGGGAAACTATATTTAGGGGTACAGAAGTCCACATATCAGCAAAATTAGCTGCTGTCCACTGGCACTATGCTACACAATCCCATCCATCTGAGTTAACAGCAGGCTATTATAATACTTTTAACAGGGATGGATACTTACCGGTTTTAAGCATGTTCAGTAAGTATGGATTCTCGATGTGCTGCTCTTGTTTTGAAATGCAAGATGTAGTTATGAGAAAGATCAACCCAGATTGTAGCCCTGAAGGTTTTCTTAGACAACTTTTGCTGGCTGCTAGGCTCTGTGACATATCACTTGAAGGTCAAAATTTTTCAACTGATTTGGATGACGACGCATTCACTCAGGTGCTGAAGATGTCAAAGTTTTACTCAAATGGTATTGAGAGACGCCCCTTCTCATTCAACTTCGTAAGAATGGACAAAAAGATGTTTGAACCCCGAAATTGGGACCGGTTTACTCGATTTGTGAGACGAATGTCTGATGGAAACATTTTTCGAGCCAGATTAAATTCTGTAGGAAGCCTACGGTTAAAAACTACAGTGGCTGCAGAAGTCGGACTCTTGTTCCAGCTATACCAGTACTCTTGA 1665 0.4366 MAISSQSFSISFISTRNDLTHPTRPLSRVTFTHFRKTLTRSSTRRFVVTSRLNSSKSPDAGGSFSPDNGDVPYELHHDLSPQRRRRGSPVFVTLPVKSVGSEGKIWRPKAMMLSLKALASAGVEGVVVEIWWGVVERNEPRVYDWRGYRELVVMACMCGLKVRAVLAFHQHGTEPDDPNWIPLPRWVLDEIDKDPDLAFSDRFGRKNMEYISLGCDILPVLRGRSPIQAYADFMRDFRDTFRPFLGVIITGVQIGMGPGGELRYPSLSSQKLNLARSRELGEFQCYDKYMLASLNASARNIGKREWGNGGPFGTGSLMQNPERTEFFRNEGGSWNMPYGKFFLEWYSDMLLLHGERICREGETIFRGTEVHISAKLAAVHWHYATQSHPSELTAGYYNTFNRDGYLPVLSMFSKYGFSMCCSCFEMQDVVMRKINPDCSPEGFLRQLLLAARLCDISLEGQNFSTDLDDDAFTQVLKMSKFYSNGIERRPFSFNFVRMDKKMFEPRNWDRFTRFVRRMSDGNIFRARLNSVGSLRLKTTVAAEVGLLFQLYQYS 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00414 554 PANTHER - 32 537 IPR001554 GO:0000272|GO:0016161
Car06g00414 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 122 136 IPR001554 GO:0000272|GO:0016161
Car06g00414 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 143 161 IPR001554 GO:0000272|GO:0016161
Car06g00414 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 165 186 IPR001554 GO:0000272|GO:0016161
Car06g00414 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 257 279 IPR001554 GO:0000272|GO:0016161
Car06g00414 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 334 353 IPR001554 GO:0000272|GO:0016161
Car06g00414 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 370 386 IPR001554 GO:0000272|GO:0016161
Car06g00414 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 387 398 IPR001554 GO:0000272|GO:0016161
Car06g00414 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 405 428 IPR001554 GO:0000272|GO:0016161
Car06g00414 554 Gene3D Glycosidases 80 543 - -
Car06g00414 554 MobiDBLite consensus disorder prediction 49 70 - -
Car06g00414 554 PANTHER BETA-AMYLASE 32 537 - -
Car06g00414 554 Pfam Glycosyl hydrolase family 14 91 514 IPR001554 GO:0000272|GO:0016161
Car06g00414 554 SUPERFAMILY (Trans)glycosidases 87 543 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00414 Car-Chr6 4322501 4325768 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00414 63 533 Glycoside Hydrolase AT4G17090 46.960 1.27e-151 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00414 K01177 - gmx:100805981 897.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00414 06 4322501 4325768 Car06g00414 06 4322501 4325768 ECH