Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00290 ATGAACGTTGGAGCTTGTTCGATGTCACGATTTCAGTTACCTATCAGACGGCGTTTCTCCAAACCCCTATTCTCTGCGCCTTGCAATTTGTCTTTGTTATCCGTTCGAAATTCCTCAGCTTCACCCACAGAATCGAAGAAGAAGGAACCGTGGTTAATTGTTGGCCTTGGTAATCCTGGCAAAAAGTACGCTGCCACACGCCACAACGTGGGCTTTGAAATGGTTGATACTATAGCTGAGGCTGAAGGAATATCTATGAACAGTGTTTCATTCAAAGCTCTATTTGGAAAAGGTTATATTGGTGATGTACCAATTATACTTGCAAAACCACAGACTTTTATGAATTTAAGTGGTGAATCTGTCGGTGCCATAGTTTCATATTACAAGATTCCATTGAAGCAAGTACTTGTGATCTTTGACGACTTGGATTTGCCTTTTGCCAAATTGCGGCTGCTACCAAAGGGTGGACATGGAGGTCACAACGGGATGAAGAGTGTTATTAATCACTTTAAAGGGAATGCTGGTTTTCCTCGCTTAAGAATTGGCATTGGACGACCTCCTGGGAAAATGGATCCTGTGGCATTCGTTCTTCGAACTTTCACTAAACACGAAAGGGAAGAGCTGAATTTTACCTTACAAGATGGATTAGACGCTGTGCGAATTCTTTTGTTGGAGGGATTTGATAAAAGTGCAACATTTGTTAATAGTTCCAAAAAGATAGAGCAAATAGGTTGA 735 0.4136 MNVGACSMSRFQLPIRRRFSKPLFSAPCNLSLLSVRNSSASPTESKKKEPWLIVGLGNPGKKYAATRHNVGFEMVDTIAEAEGISMNSVSFKALFGKGYIGDVPIILAKPQTFMNLSGESVGAIVSYYKIPLKQVLVIFDDLDLPFAKLRLLPKGGHGGHNGMKSVINHFKGNAGFPRLRIGIGRPPGKMDPVAFVLRTFTKHEREELNFTLQDGLDAVRILLLEGFDKSATFVNSSKKIEQIG 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00290 244 ProSitePatterns Peptidyl-tRNA hydrolase signature 2. 156 166 IPR018171 GO:0004045
Car06g00290 244 PANTHER PEPTIDYL-TRNA HYDROLASE 36 238 IPR001328 GO:0004045
Car06g00290 244 Pfam Peptidyl-tRNA hydrolase 52 230 IPR001328 GO:0004045
Car06g00290 244 TIGRFAM pth: aminoacyl-tRNA hydrolase 52 231 IPR001328 GO:0004045
Car06g00290 244 Hamap Peptidyl-tRNA hydrolase [pth]. 50 228 IPR001328 GO:0004045
Car06g00290 244 SUPERFAMILY Peptidyl-tRNA hydrolase-like 50 235 IPR036416 GO:0004045
Car06g00290 244 Gene3D - 36 237 IPR036416 GO:0004045
Car06g00290 244 ProSitePatterns Peptidyl-tRNA hydrolase signature 1. 63 76 IPR018171 GO:0004045
Car06g00290 244 PANTHER PEPTIDYL-TRNA HYDROLASE CHLOROPLASTIC 36 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00290 Car-Chr6 3197268 3203836 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00290 K01056 - gmx:100526866 392.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00290 06 3197268 3203836 Car06g00290 06 3197268 3203836 ECH