Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00271 ATGGCCGGAAAACAGGTCAGCGGCGAAGGTTTATCGGCGAACCTCGCCGGAATGTCGAAGAATCAGCTCTACGATATCATGTCTCAAATGAAGAATCTGATCGAACAGAATAAGCAGCAAGCGAGACAGATCCTCATTCAAAACCCTATGTTGACCAAAGCACTCTTCCAGGCACAAATTATGCTTGGAATGGTGCAATCACCTCAAGCGGTTTCTAAAGTTCAACCAGTGGCTCCTCAAAACAATCAGCAGTCAGCAGTACAACCAACCCAACAACCAAGTGTTCAGCCTGCTCCAATATTGCCTGGGAAAGGTGGCGTACAAGATCAACCAGGTGTATCACAAACTCAAATTCCTCCCAGGAGACACCAAAAGCAGCCTTCAGTGCCAGTTTCATATCCTGCTGTTCCTGCAATGAGTCATCAATCTCAGCCTACGCCTGCACATTCGTTGCAGATGCCACAACAGCCTAAAGGACATCTGACTCCCCAAGTGGCTCCAGCATCTATTCCCCAATCGTCACAACTTCCACACATACCTTCACCATCTGTTCATTCATCTTCACAACCACTTCATCCAACTCAAATGCCAACTGCTTCCAGTCAGGTGCAGCAACCATTGCAAGCACCTGGATTTCCGCATATGCCTTTGCAGCCACCACTGCCACCACAACTCAGACCACCTTCAGTGCAAACCTTCCATCCCCAATATCCCCCACAAATGGGTGCCAATTTAGGTTTTCAACATGCTGGTGCTTCTCATAATCTTCCACAATCCATGTTTCATCCAGGTACAAAACCTCCTTCTAGTGTTGGATCTACGTTCCCACTTGGGCAGACACCACTACCAAGTCAACAATCATCTCAGCCACCTTATCAGGTTGGAAATATGCCATTCGGGTCTGATTTCGGTAATCAATCTGGAAATGCAATGCAAATTGATAGAGGGTCTTCTTGGATGCCTGGTCCATCAGAAAATCTAGTACAGCATTCTGGTCCTCTGGGACCACAATCTGTGGTTTCTGTTCTGGTGGGTGCTGCTAATCAGCCTCTTAGGCCCCCTGCGTTGACACCAGAGATGGAGAAGGCACTGCTTCAGCAAGTCATGAGTCTCACACCAGAGCAGATAAATCTTTTCCTCCGGAACAAAGAAATCAAGTGCTGCAACTGCAACTGA 1176 0.4762 MAGKQVSGEGLSANLAGMSKNQLYDIMSQMKNLIEQNKQQARQILIQNPMLTKALFQAQIMLGMVQSPQAVSKVQPVAPQNNQQSAVQPTQQPSVQPAPILPGKGGVQDQPGVSQTQIPPRRHQKQPSVPVSYPAVPAMSHQSQPTPAHSLQMPQQPKGHLTPQVAPASIPQSSQLPHIPSPSVHSSSQPLHPTQMPTASSQVQQPLQAPGFPHMPLQPPLPPQLRPPSVQTFHPQYPPQMGANLGFQHAGASHNLPQSMFHPGTKPPSSVGSTFPLGQTPLPSQQSSQPPYQVGNMPFGSDFGNQSGNAMQIDRGSSWMPGPSENLVQHSGPLGPQSVVSVLVGAANQPLRPPALTPEMEKALLQQVMSLTPEQINLFLRNKEIKCCNCN 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00271 391 MobiDBLite consensus disorder prediction 109 123 - -
Car06g00271 391 MobiDBLite consensus disorder prediction 246 333 - -
Car06g00271 391 MobiDBLite consensus disorder prediction 251 314 - -
Car06g00271 391 MobiDBLite consensus disorder prediction 166 208 - -
Car06g00271 391 MobiDBLite consensus disorder prediction 75 233 - -
Car06g00271 391 MobiDBLite consensus disorder prediction 75 94 - -
Car06g00271 391 Pfam Hinge domain of cleavage stimulation factor subunit 2 10 67 IPR025742 -
Car06g00271 391 MobiDBLite consensus disorder prediction 137 159 - -
Car06g00271 391 MobiDBLite consensus disorder prediction 212 233 - -
Car06g00271 391 Gene3D - 3 73 - -
Car06g00271 391 Gene3D - 357 379 IPR038192 -
Car06g00271 391 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00271 Car-Chr6 2954784 2958831 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00271 - - lja:Lj4g3v3099310.1 550.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00271 06 2954784 2958831 Car06g00271 06 2954784 2958831 ECH