Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00249 ATGATGAATCCTCCAACTTCACAATCACATTATGTACAACAACCGTACAATCAGCCCCCCCCAGCCACCGGTTTTCCGGTGAACCATCATGGCTATAACAACCACCACCTTAAAGCCCACCAAGATTGGTCCACCGGTCTCTTTGATTGCTTCTCCGACATCCAAAGCTGTTGCATAACATGTTGGTGTCCATGCATCACCTTTGGGCGAATTGCTGAGATTGTTGACAAGGGAACAACTTCATGTGGTGTAAGCGGGGGCCTATACACATTGATATGTTGTTTCACAGGATGTGGTTGTTTATACTCATGCATATACCGTTCTAAGATGAGACACGAATACATGTTGAAGGACACTCCTTGTTGTGATTGCTTAGTTCATTATTGCTGTGAATCATGCGCATTATGTCAAGAATATCGCGAGCTTCAAAACCGTGGATTTAACATGCCCATTGGGTGGCATGGAAATGTTGCGCAAGGGAGCCGGGGAATAGCCATGACACCGACAGCTCCGGCAGTTGAACACATGATTCGTTGA 537 0.46 MMNPPTSQSHYVQQPYNQPPPATGFPVNHHGYNNHHLKAHQDWSTGLFDCFSDIQSCCITCWCPCITFGRIAEIVDKGTTSCGVSGGLYTLICCFTGCGCLYSCIYRSKMRHEYMLKDTPCCDCLVHYCCESCALCQEYRELQNRGFNMPIGWHGNVAQGSRGIAMTPTAPAVEHMIR 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00249 178 Pfam PLAC8 family 43 141 IPR006461 -
Car06g00249 178 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 42 144 IPR006461 -
Car06g00249 178 PANTHER DUF614 FAMILY PROTEIN-RELATED 19 172 IPR006461 -
Car06g00249 178 PANTHER PLAC8 MOTIF-CONTAINING PROTEIN-RELATED 19 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00249 Car-Chr6 2574242 2575330 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00249 - - gmx:100818949 251.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00249 06 2574242 2575330 Car06g00249 06 2574242 2575330 ECH