Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00248 ATGATGAACATAATCACAGAAGCAAAAGCAGAACAAGATTCTTCTTCTTATCCTCACGATGCCATGTTTCTTGTCTTACCTTACCTTTCACTGTACGAGGTTTTAACTATGTCTCGTGTTTGCACATCCCTAAGGGATGCTGTCAACAATGATGTATTACTGTGGCTTCATGTTATTGTTGAAAGGCCTCTCAATTCAAGACTCACTGATGAGACTCTATTTCAAATCACTTCCAAGGGAAATGGCAGGATTCAAACACTCGCTCTAATCAACTGCATGCACATTACTGACCAGGGATTACAAACGGTTGTGGAACAAAACCCTTTCATTCATGAGCTTCATATACCAGCATGCACTAACATAACTCCTGAAGGAGTTCTAAGAGTTGTGAAAACACTGTGCCAAAGAAGTAATTGCTTAACCACCTTGAGTATAAACGGCATCTACAACCTACAACAGGAGCATCTTCTCATGCTTGCCTCAAACCTCAGAGAGAACCTTCCATTAGCGGATCGTCAATCAcagcagcagcagcagcaACCTACATACTATCATGAACGCGGCAGTGTTTCAGCGTTCAAGCGCCGAGAAAACCGGACGATTATTGATTTGGAGGTATGTCCTAAGTGCTTTGAGGTGAGGATGGTATATGACTGTCCAAAAGGGGACTGCAGGGGGTGCATATTTTGTATTCCAAGATGTGAAAACTGCGGTCGTTGTATTATTGAATCCGAAGAAGTGGAAGAGGGTGCTTGTGGAGATACCTTGTGCCTTGATTGTTGGTTACAGATTCCTAAGTGCAATTTCTGTAACAAACCATATTGTAAGCAGCACATAGATTGGTGGTGCACTTCTTCAGACTCTTCATTGCTCTGCAGAGTTTGTGATGATAATTCTCATGGATATACATACACTGATGTTCTATAA 927 0.4078 MMNIITEAKAEQDSSSYPHDAMFLVLPYLSLYEVLTMSRVCTSLRDAVNNDVLLWLHVIVERPLNSRLTDETLFQITSKGNGRIQTLALINCMHITDQGLQTVVEQNPFIHELHIPACTNITPEGVLRVVKTLCQRSNCLTTLSINGIYNLQQEHLLMLASNLRENLPLADRQSQQQQQQPTYYHERGSVSAFKRRENRTIIDLEVCPKCFEVRMVYDCPKGDCRGCIFCIPRCENCGRCIIESEEVEEGACGDTLCLDCWLQIPKCNFCNKPYCKQHIDWWCTSSDSSLLCRVCDDNSHGYTYTDVL 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00248 308 ProSitePatterns 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 224 235 IPR017900 -
Car06g00248 308 ProSiteProfiles F-box domain profile. 11 58 IPR001810 GO:0005515
Car06g00248 308 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 14 300 - -
Car06g00248 308 SUPERFAMILY RNI-like 67 167 - -
Car06g00248 308 SUPERFAMILY F-box domain 16 68 IPR036047 GO:0005515
Car06g00248 308 Gene3D Ribonuclease Inhibitor 4 224 IPR032675 -
Car06g00248 308 PANTHER F-BOX PROTEIN SKIP28 14 300 - -
Car06g00248 308 Pfam F-box domain 19 54 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00248 Car-Chr6 2570330 2571614 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00248 - - vra:106769044 448.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00248 06 2570330 2571614 Car06g00248 06 2570330 2571614 ECH