Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00192 ATGTCATTTCACGGCGGCTCCAGTGGCCGCCGGCCGACAGCTTCGCCGTCAACTGGAAAAAACAGCGTTGAGGCTGGAAACTCTAGCAAGGGAAAGGAAAGGGCGAGATTGATGCTGAATCCGGAGAAGAATCACAAACCGGAAAAGTACGATGACTTGGAACTCGATATCTCTCCATGGATTTTCAGCTCGTTGGAGAGATACCTTCCGCGGCACTTGCTCCGTGCGCCTCGTGACCTGAAAGTTAATTACATGCGCGAAATTTTGCACGATTACGCGCCTCCATCGTTGCGCTACAGAGATCAAAAGCAAAGAGAATATAGAGAGAAGATAATGTCAAATTATCTGCCTCTGCATAAAGAGTTGTACACTATTGATCCTGTAGCATTCTTTGTACCGACATTTCTGAAAGCGATTAATGATAATACAGAACAAAGCTTTAGACGCATAATGTCTGAACCTGCCCCAGGCATTTTTACATTTGAAATGCTTCAGCCACGCTTTTGTGAGTTATTGATATCTGAGTTTGAAAATTTTGAGAAGTGGGTTAACAGAAGAACATTTTGTGTTATGCGTCCCAATACAATGAATCAATATGGTGCTGTACTTGACGACTTTGGCCTTCAAACCATGCTTAACAAGCTTATGGAATATTTTATTTGTCCGTTGTCAAAAGTGTTCTATGCAGAAATTGGCGGATCAACCCTGGATTCTCACCATGGGTTTATTGTTGAATGTGGTTTACATAGAGATGTTGAAACAGAATTCCATGTGGATGACTCAGAAGTTACCTTAAATGTTTGCCTGGGTAGGCAATTTACTGGAGGAGAGTTGTATTTTCGGGGCATGCGATGCGATAAACATGTACATACAATAAGTCGTTCAGAGGAATACTTTGATTATTCGCATGTCCCTGGTTGTGCTGTGCTTCATCATGGCCGTCATCGTCATGGTGCTAGAGCCACAATATCCGGTCATCGGATCAACCTACTTATGTGGTGCAGAAGTTCTTTTTTTAGAGAAATGCAAAAGTATAAAAGAGATTTCTCTAGCTGGTGTGCTGATTGCAATCACGAGAAGGAAGATAAGCTGCGTTCAGCATATGATACTACCAGAATGGTACTGTTGAGGAGGGAAGGTGAAACAAATGCATAA 1155 0.4251 MSFHGGSSGRRPTASPSTGKNSVEAGNSSKGKERARLMLNPEKNHKPEKYDDLELDISPWIFSSLERYLPRHLLRAPRDLKVNYMREILHDYAPPSLRYRDQKQREYREKIMSNYLPLHKELYTIDPVAFFVPTFLKAINDNTEQSFRRIMSEPAPGIFTFEMLQPRFCELLISEFENFEKWVNRRTFCVMRPNTMNQYGAVLDDFGLQTMLNKLMEYFICPLSKVFYAEIGGSTLDSHHGFIVECGLHRDVETEFHVDDSEVTLNVCLGRQFTGGELYFRGMRCDKHVHTISRSEEYFDYSHVPGCAVLHHGRHRHGARATISGHRINLLMWCRSSFFREMQKYKRDFSSWCADCNHEKEDKLRSAYDTTRMVLLRREGETNA 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00192 384 MobiDBLite consensus disorder prediction 27 45 - -
Car06g00192 384 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 218 336 IPR005123 -
Car06g00192 384 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 21 382 - -
Car06g00192 384 MobiDBLite consensus disorder prediction 1 26 - -
Car06g00192 384 Gene3D q2cbj1_9rhob like domain 159 336 - -
Car06g00192 384 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 21 382 - -
Car06g00192 384 SMART p4hc 156 335 IPR006620 GO:0005506|GO:0016705|GO:0031418
Car06g00192 384 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00192 Car-Chr6 2117502 2123286 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00192 - - mtr:MTR_8g106610 604.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01652 08 26339157 26345282 Car06g00192 06 2117502 2123286 ECH
Car06g00192 06 2117502 2123286 Car06g00192 06 2117502 2123286 ECH
Car06g00192 06 2117502 2123286 Car08g01652 08 26339157 26345282 PCT