Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00189 ATGGCAATTCCTCCACACCGTTCCTCAAAGACTGAATCCTATGTCGACAACAAGCGCAAGGATGACGTCCGTCAAGCCAACATCATCGCCGCACGTTCCGTCGCCAACGCCGTTCGTACCAGTCTCGGTCCTAAAGGTATGGACAAGATGATCTCCACTTCTTCCGACGAGGTCATTATCACAAACGACGGTGCCACCATCCTCAACAAGATGAAAGTCCTCCAACCCGCTGCTAAGATGCTCGTCGAACTTTCCAAATCTCAAGATTCCGCCGCCGGCGACGGTACCACTACAGTCGTTGTCATCGCTGGCGCGCTTCTCGAAAAATGTCTCCTCCTCCTCTCTCACGGTATTCATCCTACCGTCATCTCAGATTCTCTCTACAAAGCCTCCGTCAAGGCCGTCGACGTCCTCACTGCCATGGCCGTTCCTGTTGAACTCTCCGACCGTGACTCTCTTGTTAAATCCGCTAGCACTTCTCTTAACAGCAAGGTTGTAAGCCAGTACTCCTCCCTCCTCGCTCCCCTCGCCGTCGACTCAGTCCTCTCCGTTGTAGACCCCGCCAAACCCGAAATGGTCGATCTCCGTGACGTCAAGATCGTGAAGAAGCTCGGTGGAACCGTGGATGATACCGAGCTTGTGAAGGGTTTGGTGTTCGATAAGAAGGTTAGCCACGCCGCTGGTGGACCTACCCGAATGGAGAATGCTAAAATTGCTGTGATTCAGTTTCAGATTTCACCTCCCAAAACCGATATCGAACAGAGCATTGTGGTGAGTGATTATTCTCAGATGGATAGGATTTTGAAGGAAGAAAGGAGTTATATTTTGGGTATGATTAAGAAGATCAAGGCAACTGGTTGTAATGTTTTGTTGATTCAGAAGAGTATTTTGAGAGATGCTGTTACTGATTTGTCTTTGCATTACCTTGCTAAAGCTAAGATTTTGGTGATTAAAGATGTTGAGCGGGATGAGATTGAGTTCATTACCAAGACTCTTAACTGTTTGCCTATTGCTAATATTGAGCATTTTCGTGTCGAGAAGTTGGGTTATGCTGATCTTGTGGAGGAAGTTTCTCTTGGGGATGGAAAGATTGTGAAGATTTCTGGTATTAAGGATATGGGAAAGACCACGACCGTGCTTGTTCGTGGATCCAATCTGCTTGTGCTTGATGAAGCAGAGAGGAGTCTGCATGATGCTTTGTGTGTTGTTAGGTGTTTGGTTGCTAAAAGGTTTTTGATTGCCGGTGGTGGCGCTCCAGAGATTGAGTTGTCGAGGCAATTGGGTGCTTGGGCAAAGGTGTTGCATGGGATGGAGGGTTATTGCATTCGAGCATTTGCTGAGGCGCTTGAAGTCATACCTTATACTTTGGCTGAGAATGCTGGTTTGAACCCAATTGCGATTGTTACTGAGCTGAGGAATCGTCATGCGCAGGGTGAGATAAATGCTGGAATCAATGTCAGGAAAGGTCAAATTACAAACATCCTTGAGGAGAATGTGGTGCAGCCACTGCTTGTAAGCACGAGTGCTATCACCTTGGCAACAGAGTGCGTGCGGATGATTTTGAAGATTGATGATATTGTCACTGTGAGGTAG 1593 0.4752 MAIPPHRSSKTESYVDNKRKDDVRQANIIAARSVANAVRTSLGPKGMDKMISTSSDEVIITNDGATILNKMKVLQPAAKMLVELSKSQDSAAGDGTTTVVVIAGALLEKCLLLLSHGIHPTVISDSLYKASVKAVDVLTAMAVPVELSDRDSLVKSASTSLNSKVVSQYSSLLAPLAVDSVLSVVDPAKPEMVDLRDVKIVKKLGGTVDDTELVKGLVFDKKVSHAAGGPTRMENAKIAVIQFQISPPKTDIEQSIVVSDYSQMDRILKEERSYILGMIKKIKATGCNVLLIQKSILRDAVTDLSLHYLAKAKILVIKDVERDEIEFITKTLNCLPIANIEHFRVEKLGYADLVEEVSLGDGKIVKISGIKDMGKTTTVLVRGSNLLVLDEAERSLHDALCVVRCLVAKRFLIAGGGAPEIELSRQLGAWAKVLHGMEGYCIRAFAEALEVIPYTLAENAGLNPIAIVTELRNRHAQGEINAGINVRKGQITNILEENVVQPLLVSTSAITLATECVRMILKIDDIVTVR 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00189 530 PRINTS Tailless complex polypeptide 1 (chaperone) signature 36 52 IPR017998 GO:0140662
Car06g00189 530 PRINTS Tailless complex polypeptide 1 (chaperone) signature 58 76 IPR017998 GO:0140662
Car06g00189 530 PRINTS Tailless complex polypeptide 1 (chaperone) signature 88 107 IPR017998 GO:0140662
Car06g00189 530 PRINTS Tailless complex polypeptide 1 (chaperone) signature 378 400 IPR017998 GO:0140662
Car06g00189 530 PRINTS Tailless complex polypeptide 1 (chaperone) signature 412 424 IPR017998 GO:0140662
Car06g00189 530 CDD TCP1_delta 16 529 IPR012717 GO:0005524|GO:0006457|GO:0016887|GO:0051082
Car06g00189 530 Gene3D GroEL 215 374 IPR027409 -
Car06g00189 530 SUPERFAMILY GroEL-intermediate domain like 147 408 IPR027410 -
Car06g00189 530 ProSitePatterns Chaperonins TCP-1 signature 1. 39 51 IPR002194 GO:0005524|GO:0006457|GO:0016887|GO:0051082
Car06g00189 530 ProSitePatterns Chaperonins TCP-1 signature 3. 88 96 IPR002194 GO:0005524|GO:0006457|GO:0016887|GO:0051082
Car06g00189 530 TIGRFAM chap_CCT_delta: T-complex protein 1, delta subunit 16 529 IPR012717 GO:0005524|GO:0006457|GO:0016887|GO:0051082
Car06g00189 530 SUPERFAMILY GroEL equatorial domain-like 17 528 IPR027413 -
Car06g00189 530 SUPERFAMILY GroEL apical domain-like 210 383 IPR027409 -
Car06g00189 530 PANTHER CHAPERONIN 11 528 IPR017998 GO:0140662
Car06g00189 530 PANTHER T-COMPLEX PROTEIN 1 SUBUNIT DELTA 11 528 - -
Car06g00189 530 Gene3D - 31 527 IPR027413 -
Car06g00189 530 Pfam TCP-1/cpn60 chaperonin family 34 528 IPR002423 GO:0005524
Car06g00189 530 Gene3D - 144 410 IPR027410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00189 Car-Chr6 2098620 2100737 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00189 198 424 EF-hand Containing Proteins AT3G14270 24.898 1.31e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00189 K09496 - gmx:100786888 966.452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00189 06 2098620 2100737 Car06g00189 06 2098620 2100737 ECH