Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00181 ATGGAAGTTCTGATGCTGGAGGCTCCACCGTCTTCCGGTAGGTCAAGCAATTCCTACCCCGAATTCATCGACGCATTACCTTACATAGACTATGACTACAGTAACCCCAGGGTCAAGATCGAAGTTGATCGTCTCGTCGAGGAAGAGATGCGCCGCAGCTCCAAAAAACCCGCAGATTTCCTCAAAGATGAGTCGAGATATGAATTAGAAGTTCCAGCAATGAATAAAAGGAGCGATGAAACTGCTTGGAAACAAGCTCTTCAAAGAGCTCAACGACTACTTCAATATCAAACCATGAGGATGGAAAATTTGGAGTTGTTGTTAAAATATGGTCCTGATGCCTGGAAACAGCACAACCAACGATTGGAAGTATACTTGACAAGAATGCAGAAATTAGCTCAGGAACAAAATGAAAAGATTGAAAAAGTTAATCGTGAAAGGAAATATCATCAGcaaaatactgcatatgagcttaatgctttgtCAATGCAATGGAAGGAGCTCTGTCAGAAAAATATAGGCATCAGTGCTGCGTGTGCTTCTGTTGAAATTTGCCTACATGAACTGAGAAGAGAAGCTGCAGAAAGAGGCTGGAACTTGGATGCTATCACTGAAAATGGCCAATTAAATCATTCCGAGTCGTGA 645 0.4047 MEVLMLEAPPSSGRSSNSYPEFIDALPYIDYDYSNPRVKIEVDRLVEEEMRRSSKKPADFLKDESRYELEVPAMNKRSDETAWKQALQRAQRLLQYQTMRMENLELLLKYGPDAWKQHNQRLEVYLTRMQKLAQEQNEKIEKVNRERKYHQQNTAYELNALSMQWKELCQKNIGISAACASVEICLHELRREAAERGWNLDAITENGQLNHSES 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00181 214 Pfam Breast carcinoma amplified sequence 2 (BCAS2) 22 59 IPR008409 GO:0006397
Car06g00181 214 Pfam Breast carcinoma amplified sequence 2 (BCAS2) 63 195 IPR008409 GO:0006397
Car06g00181 214 PANTHER PRE-MRNA-SPLICING FACTOR SPF27 63 197 - -
Car06g00181 214 PANTHER PRE-MRNA-SPLICING FACTOR SPF27 15 63 - -
Car06g00181 214 Coils Coil 126 153 - -
Car06g00181 214 PANTHER BCAS2 PROTEIN 63 197 IPR008409 GO:0006397
Car06g00181 214 PANTHER BCAS2 PROTEIN 15 63 IPR008409 GO:0006397
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00181 Car-Chr6 2030459 2034340 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00181 K12861 - gmx:100783349 324.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00181 06 2030459 2034340 Car06g00181 06 2030459 2034340 ECH