Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00169 ATGGCTACTATCTTTGGTTCACCACCATTTTTGTCACTCCCTCTTAACAGAACCACTCATCAAATTGCTTCTTCTTCTTCATCATCACAAACACCTCCTCCCCCACAACAACCTCAGCCCTCAGATTCATCCCCACAGTCAACAACAAATTTGAGTGAAGAGTCAGTGCAAGTCTCTGTCAAAGCACAGCAGCAGAAGCCTATTAAACCAGTAACTTCATCAACTAAGGTTGATTCCACAGATTGGATAGCCACTTCCTTGACAAAAAGGTTTGGACTTGGAGCTGGTCTTGCATGGGTTGGTTTTCTTGCATTTGGTGTTATCTCAGAACAAATTAAGACTCGTCTTGAGGTTTCTCAACAAGAAGCAAATACAAGGAATGTTGAAGAGGAGAAAGAGGTGACTCTGCCTAATGGCATAAGGTATTATGAATTGAAAATCGGCGGAGGCGCTTCGCCAAGGCAAGGTGATTTGGTTGTGATTGATATAATGGGAAAAGTTGAAAGCACAGGAGAAGTATTTGTGAACACATTTGAAGGGGAGAAGAAGCCATTGGCACTAGTAATGGGTTCAAGACCATATAGTAAGGGAGTATGTGAAGGGATAGAATATGTACTAAAAACTATGAAAGCAGGAGGCATGAGGAAAGTAATTGTGCCTCCTGAATTGGGATTTAGAGAGAATGGTGCTGATTTGGGCTCTGGTGTTCAAATTCCTCCACTTGCTACACTTGAATACATTGTAGAGGTTGATAAAGTGTCCATTGCACCTGCTTGA 777 0.4208 MATIFGSPPFLSLPLNRTTHQIASSSSSSQTPPPPQQPQPSDSSPQSTTNLSEESVQVSVKAQQQKPIKPVTSSTKVDSTDWIATSLTKRFGLGAGLAWVGFLAFGVISEQIKTRLEVSQQEANTRNVEEEKEVTLPNGIRYYELKIGGGASPRQGDLVVIDIMGKVESTGEVFVNTFEGEKKPLALVMGSRPYSKGVCEGIEYVLKTMKAGGMRKVIVPPELGFRENGADLGSGVQIPPLATLEYIVEVDKVSIAPA 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00169 258 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 152 250 IPR001179 GO:0003755
Car06g00169 258 Gene3D - 115 253 IPR046357 GO:0003755
Car06g00169 258 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 156 254 IPR001179 GO:0003755
Car06g00169 258 MobiDBLite consensus disorder prediction 42 75 - -
Car06g00169 258 MobiDBLite consensus disorder prediction 12 30 - -
Car06g00169 258 MobiDBLite consensus disorder prediction 1 75 - -
Car06g00169 258 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP17-2, CHLOROPLASTIC 1 258 - -
Car06g00169 258 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP17-2, CHLOROPLASTIC 1 258 - -
Car06g00169 258 SUPERFAMILY FKBP-like 80 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00169 Car-Chr6 1931650 1933139 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00169 - - lang:109332983 379.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00169 06 1931650 1933139 Car06g00169 06 1931650 1933139 ECH