Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00151 ATGCCAATTCCCACCGCCAAATTGTTtctatctcttctcactctctctctcctcacactctcCGTCACCGCCCGCCCCTACGTTCTTGTCCTCTCCCAGGAAGACTTCAAAGACGATGTCCCctccgatcccgactccgccgccgagtgggacgagttcggcgactccgactcccacAAATCCGAAGAGGATCTCGACCCTGGCTCATGGCGCCAAATCTTCGAACCCTCTTCCACCGACCCCCAACCCCAATCCGAAACAGACGCTCTCTACTACTCCGCCGCTTCAAAGCTAATGTCCGGTGACGCCCGTTTAATTGAAGAGGGCTCCGGCGAAATCGAGGCGGCTTCTGAATCTGGCTACTCGGCTGCCCAATCAGTATTAGGGTTTCTATGGGGAATGGGGCTTTTGAGAGAGAGAAGCAAAGAGAAAGCTTTTGTTTACCATCATTTTGCTTCTGAGGGTGGCAATATGCAATCCAAAATGGCTCTCGCTTATCTCTACACTCGCCAAGACATGTTTGAAAAATCGGTTAAGCTTTATGCTGAATTGGCAGAAGTAGCTGTAAATAGTTTTTTGATTTCGAAAGATTCTCCGGTGATTGAACCTGTTAGGCTACACAATGGAGCTGAAGAGAACAAAGAGGCACTCAGAAAGTCCAAAGGGGAAGAGGACGAAGACTTTCAGATTCTGGAGTACCAGGCACAGAAAGGGAATGCTGCTGCCATGTACAAAGTGGGACTCTTTTACTATTTTGGGCTTCGTGGATTGAGGCGTGACCATTCCAAGGCACTCTCCTGGTTCTTGAAGGCTGTTGAGAAAGGAGAGCCTCGTTCTATGGAACTTCTCGGAGAGATATATGCTAGGGGAGCTGGTGTTGAGAGAAACTATACTAAAGCTTTCGAATGGCTTACTCTTGCATCTAAACACCACCTCTATTCTGCTTATAATGGGATTGGTTATTTGTATGTCAAAGGCTATGGAGTAGACAGCAAGAATTACACTAAAGCAAAAGAGTATTTTGAAAAGGCTGCTGATAACGACGAGGTTGGTGGCCATTATAACCTGGGTGTCATGTACCTCAAGGGAATTGGAGTGAAAAGAGATGTAAAGTATGCATGTAAATTTTTTATAGTGGCTGCCAACCACGGTCAACCAAAGGCTTTCTACCAGCTGGCTAAGATTTTTCATCTTGGTGTTGGGTTCAAAAAGAACGTTCCCTTGGCTACTGCTCTATACAAACTAGTCGCAGAGCGAGGTCCTTGGAGCTCTTTATCCAGATGGGCACTGGAATCATACTTAAAAGGTGATGTTGGCAAGGCATATATGCTGTACTCAAGAATGGCTGAGATGGGCTATGAAGTGGCACAGAGTAATGCTGCTTGGATTCTTGACAAATATGGAGAACGAAGCATGTGCATGGGTGAATCTGGATTGTGCACTGATGCAGAAAGGCATCAGCGGGCACATTCTTTGTGGTGGCAAGCTTCTGAGCAGGGTAATGAACATGCTGCTTTACTGATTGGAGATGCATATTACTATGGTCGGGGAACAGCCCGGGATTATGAGCGAGCTGCTGAGGCTTACATGCATGCTAAAGCGCAATCTAATGCACAAGCCATGTTCAATCTTGGATACATGCATGAGCATGGCCAAGGACTTCCATTTGACCTTCATCTAGCCAAGCGTTACTATGATGAAGCTCTTGAGCATGATCCTGCAGCTAAGTTGCCCGTCTCACTGGCTCTTACAAGCTTGTGGGTTCGGAAGAACCATGCTGACAGTTTACTGGTCCACATAATTGATTCTTTGCCAGATGTCTATCCAAAACTAGAAGCTTGGGTAGAGAATGTGCTTTTGGAGGAGGGAAATGCCACAATTCTTACCCTCTTTGCGTGCCTCCTAACTGTGCTGTATCTGCGCGAGAGGCAACGAAGGCAAGCTGCTGTTGTAGCTGGTGAGGTCGCTCAGCCAAATCGCCCTAACGAGCTTGGTATGCCTGCACTCATCTAG 2013 0.4471 MPIPTAKLFLSLLTLSLLTLSVTARPYVLVLSQEDFKDDVPSDPDSAAEWDEFGDSDSHKSEEDLDPGSWRQIFEPSSTDPQPQSETDALYYSAASKLMSGDARLIEEGSGEIEAASESGYSAAQSVLGFLWGMGLLRERSKEKAFVYHHFASEGGNMQSKMALAYLYTRQDMFEKSVKLYAELAEVAVNSFLISKDSPVIEPVRLHNGAEENKEALRKSKGEEDEDFQILEYQAQKGNAAAMYKVGLFYYFGLRGLRRDHSKALSWFLKAVEKGEPRSMELLGEIYARGAGVERNYTKAFEWLTLASKHHLYSAYNGIGYLYVKGYGVDSKNYTKAKEYFEKAADNDEVGGHYNLGVMYLKGIGVKRDVKYACKFFIVAANHGQPKAFYQLAKIFHLGVGFKKNVPLATALYKLVAERGPWSSLSRWALESYLKGDVGKAYMLYSRMAEMGYEVAQSNAAWILDKYGERSMCMGESGLCTDAERHQRAHSLWWQASEQGNEHAALLIGDAYYYGRGTARDYERAAEAYMHAKAQSNAQAMFNLGYMHEHGQGLPFDLHLAKRYYDEALEHDPAAKLPVSLALTSLWVRKNHADSLLVHIIDSLPDVYPKLEAWVENVLLEEGNATILTLFACLLTVLYLRERQRRQAAVVAGEVAQPNRPNELGMPALI 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00151 670 Gene3D Tetratricopeptide repeat domain 212 595 IPR011990 GO:0005515
Car06g00151 670 Gene3D Tetratricopeptide repeat domain 91 200 IPR011990 GO:0005515
Car06g00151 670 MobiDBLite consensus disorder prediction 52 68 - -
Car06g00151 670 Pfam Sel1 repeat 122 157 IPR006597 -
Car06g00151 670 Pfam Sel1 repeat 314 348 IPR006597 -
Car06g00151 670 Pfam Sel1 repeat 435 453 IPR006597 -
Car06g00151 670 Pfam Sel1 repeat 538 572 IPR006597 -
Car06g00151 670 Pfam Sel1 repeat 504 526 IPR006597 -
Car06g00151 670 Pfam Sel1 repeat 240 275 IPR006597 -
Car06g00151 670 Pfam Sel1 repeat 278 310 IPR006597 -
Car06g00151 670 Pfam Sel1 repeat 353 384 IPR006597 -
Car06g00151 670 PANTHER ERAD-ASSOCIATED E3 UBIQUITIN-PROTEIN LIGASE COMPONENT HRD3A-RELATED 5 652 - -
Car06g00151 670 SUPERFAMILY HCP-like 332 461 - -
Car06g00151 670 PANTHER ERAD-ASSOCIATED E3 UBIQUITIN-PROTEIN LIGASE COMPONENT HRD3A-RELATED 5 652 IPR044623 GO:0030433
Car06g00151 670 MobiDBLite consensus disorder prediction 37 68 - -
Car06g00151 670 SUPERFAMILY HCP-like 433 574 - -
Car06g00151 670 SMART sel1 313 349 IPR006597 -
Car06g00151 670 SMART sel1 386 421 IPR006597 -
Car06g00151 670 SMART sel1 240 276 IPR006597 -
Car06g00151 670 SMART sel1 502 537 IPR006597 -
Car06g00151 670 SMART sel1 277 312 IPR006597 -
Car06g00151 670 SMART sel1 538 573 IPR006597 -
Car06g00151 670 SMART sel1 350 385 IPR006597 -
Car06g00151 670 SMART sel1 122 157 IPR006597 -
Car06g00151 670 SUPERFAMILY HCP-like 221 330 - -
Car06g00151 670 SUPERFAMILY HCP-like 114 187 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00151 K14026 - gmx:100787823 1163.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00151 06 1805587 1811281 Car06g00151 06 1805587 1811281 ECH