Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00150 ATGTCTTCCGTCTTAGAGGGATGTAGGGAGCACTTGTTGGATGTGGAGGAGCAGCACTATGATGAGGAAGAAGATTTGAAGAGGAAACCTAAATTCCAGATTCAAAATCTCAGGAAACTATCCGATGATGGAAAAATTCATATACTGAATGGCATCACCCTTGACATCCCAAAGGGTGTTATTGTTGGGATCATTGGTCCCAGTGGTAGCGGCAAGTCAACCCTTTTGAGAGCCTTGAACCGTCTCTGGGAGCCACCTTCCTCCTCCGTCTTCCTCGATGCTCAAGACATCTGCCACCTCGATGTCCTTTCCCTCCGCCGTAAGGTCGCCATGCTCTTTCAGCTCCCTGCCCTTTTTGAAGGGACAGTTGCGGAGAATGTGAGGTATGGTCCACAACTGAGAGGAATAAAGCTAACGGACGATGATGTGAGTAAGTTGCTTTTAATGGCGGATCTGGATGCTTCTTTCATGGATAAGTCTGGTGCTGACCTCTCTGTTGGTCAGGCTCAAAGAGTTGCACTTGCCAGGACTCTAGCTAACCAACCTGAGGTTTTGCTACTGGATGAGCCTACTAGTGCATTAGATCCAATATCCACAGAAAACATAGAAGCTGCGCTGATGAAATTGAACAAGAGTCAGGGCATGACACTCATCATGGTTTCACATAGCATCAAACAAATCCAGAGGATGGCTCACGTTGTGTGCTTGCTTGTTGATGGTCAAATTGTGGAAGTTCTTAAACCTCATCAACTATCTCAAGCTAAGCATCCCATGGCACGGAGGTTTCTTGAACTCAGTCCAGTCCCAGCCCCAGGTGGTGAATtggtgccacatgcctcttcacccaccgactcttccatttcttcctctgatcttgacaccgagTCTACGGGATCATTCTTCCATGATACAAGCACCACGCTCGGTACTCTCATGGGCCTCACCTTCTCACTCCCATCTCAGAATCGGAACACACGTTCCGCCACCGCCGGGACTGCCAACTCTAAGAGGAATCTCAATGCCAACGCCGAGGCCATCGTGTTGGCCAAGCGCCGGAGGAGGTGGTGGCGCTTTTGCGGAGACGCCGATGCGAGGTCCGCCTCGCTGGGTGAGTTCCTTGAGATTGAACGCCGATTCGGCGACGACGCTTTTTACGGTCCGGCTGCTGAGCTCGAAGGACTGGTGGTGGATTCACAGCAGCAGAGAAATAACGACAGAGCGTTGTTTGCCGATGGGAGAGTTCTTCCACCGTCCGTCGTTGACGAAAGAGCATCCACCGCGGGGACTCTTTGTAGTAGATTTCCGGTTTCGCTCACCGGGATCTGTAGCGGCGGTGCTGGATGA 1344 0.4866 MSSVLEGCREHLLDVEEQHYDEEEDLKRKPKFQIQNLRKLSDDGKIHILNGITLDIPKGVIVGIIGPSGSGKSTLLRALNRLWEPPSSSVFLDAQDICHLDVLSLRRKVAMLFQLPALFEGTVAENVRYGPQLRGIKLTDDDVSKLLLMADLDASFMDKSGADLSVGQAQRVALARTLANQPEVLLLDEPTSALDPISTENIEAALMKLNKSQGMTLIMVSHSIKQIQRMAHVVCLLVDGQIVEVLKPHQLSQAKHPMARRFLELSPVPAPGGELVPHASSPTDSSISSSDLDTESTGSFFHDTSTTLGTLMGLTFSLPSQNRNTRSATAGTANSKRNLNANAEAIVLAKRRRRWWRFCGDADARSASLGEFLEIERRFGDDAFYGPAAELEGLVVDSQQQRNNDRALFADGRVLPPSVVDERASTAGTLCSRFPVSLTGICSGGAG 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00150 447 PANTHER ABC TRANSPORTER I FAMILY MEMBER 17 6 266 - -
Car06g00150 447 MobiDBLite consensus disorder prediction 271 293 - -
Car06g00150 447 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 32 264 IPR003439 GO:0005524
Car06g00150 447 Gene3D - 29 267 IPR027417 -
Car06g00150 447 MobiDBLite consensus disorder prediction 279 293 - -
Car06g00150 447 Pfam ABC transporter 49 192 IPR003439 GO:0005524
Car06g00150 447 PANTHER ABC TRANSPORTER I FAMILY MEMBER 17 6 266 IPR005670 GO:0005315|GO:0016020|GO:0035435
Car06g00150 447 SMART AAA_5 58 248 IPR003593 -
Car06g00150 447 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 254 IPR027417 -
Car06g00150 447 ProSitePatterns ABC transporters family signature. 164 178 IPR017871 GO:0005524
Car06g00150 447 CDD ABC_PstB_phosphate_transporter 32 251 IPR005670 GO:0005315|GO:0016020|GO:0035435
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00150 Car-Chr6 1797849 1801529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00150 46 245 Calmodulin-binding Proteins AT2G36910 33.981 1.72e-27 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00150 K02068 - gmx:100791365 382.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00150 06 1797849 1801529 Car06g00150 06 1797849 1801529 ECH