Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00107 ATGGATTCTTTATCTAAAAAGGTTGAAGATTCTAAAAAGATAAATGATGGGTCTCGTTCTTCTCTCACTGATTCAAGTTTTGAGTCTAGACAAACAAGTTTCAGTGGATCTAGCACCTCGTTTTCTGCTTCTGAAGAAACAAAATCAGAAGAGTCTTCTTCTCTTGCTCCTTTAGGTTGGCCTATTCTAAAAGCTACACTCTCCAATTCCAAGCAATTGACTTCTGATGATAAAGATAAAGATAACAAACACAAATCCAACTTGGAACTCACAAAGTTCACCAATATTGATTTCAAAATCTCAGATGTTGATATTATGATGAAGGAAAGGTTTGCAAAATTGTTGCTTGGTGAAGATATGTCAGGTTCAGGAAAAGGGGTTTGCACTGCTTTGGCAATTTCCAATGCCATTACTAATCTCTGTGCCACAGCATTTGGGCAACTATGGAGACTAGAACCACTACCTTGCGAAAAGAAAGAAATGTGGCGGAGAGAGATCGAATTGCTTGTTAGCGTTAGCGATCACATTGTTGAATTAATACCTTCTTGGCAAACATTTCCTGATGGAAAGAAACTCGAGGTAATGACTTGCAACCCTAGGACAGATATTTGTATCAATCTTCCAGCCCTTCGCAAACTCGATAACATGCTACTCGAAATATTAGACAGTTTCAAGGGTACAGAATTTTGGTATGTAGACCAAGGAATTGTAGCCGCTGGCGCTGATGCAGATGGTTCGGGCTCTTTTCGCAAGGCAGTTCAGCGGCAAGAAGAGAAATGGTGGCTCCCCGTACCCCGCGTTCCCCCCGAAGGTCTCAGCGAGAACTCAAGAAAGCAGTTGAATCATTCCCGAGAAAGCGCAGGCCAAATTCTCAAAGCAGCCATGTCTATCAATAGCATTGCTTTGTCTGAAATGGAAGTCCCTGAGTCATATTTGGAATCCCTCCCTAAGAATGGAAGAACTTGCCTAGGGGATTTTATTTACCGATACATCACATCAGATAATTTATCCGCGGTGTGCCTGCTTGATTTCTTAGACCTTTCTTCTGAACATGTTGCACTAGAGATTGCGAACCGCATTGAAGCTGCAATTTATGTATGGCGTCGAAGAGCTCATCACAAATCCTCACCGAATCCCTACCGATCAACTACAAAGTATTCATGGGGGATTGTCAAGGACTTCATGGTTGATGGATATAGGAGAGAATTGCTAGCTGATAGAGCTGAAAACATTCTAAACTCGTTAAAGCATCAGTTTCCCGGCTTAACTCAAACGACCTTGGATACCTGCAAGATCCAATGCAACAAGGATGTTGGAAAATCAATTCTGGAAAGCTACTCTAGAGTTTTGGAGAGCATTGCTTTTAACATCGTAGCTCGAATCGATGATTTGTTATACGTTGATGACTTGACTAAAAATTCAGATAAATCTGAATTGGTTGCTACATCAGTTAGTACGGTTTCTCAGAAGATTTCACATCCGTTTTCAGTGTCTGTCTCAGGCACTCCACATAAAGCAGCATTCGGCACACCTAAGTTTTCACCTGCGCCATTGATTAGTCCTGCAAGAGGGGAGATAACCCCTTTCCTCCACAACAACAACAAAGCTCATCGTAGTGGTTTAAGGGTGAGAAGAGTATTGTCAAATTATCTTGGCGTAGAGACTAAAACAAAGACATGTAGCTATCCAACCGAGGTTAATTGTTCAAAACCTGAATAG 1719 0.4142 MDSLSKKVEDSKKINDGSRSSLTDSSFESRQTSFSGSSTSFSASEETKSEESSSLAPLGWPILKATLSNSKQLTSDDKDKDNKHKSNLELTKFTNIDFKISDVDIMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATAFGQLWRLEPLPCEKKEMWRREIELLVSVSDHIVELIPSWQTFPDGKKLEVMTCNPRTDICINLPALRKLDNMLLEILDSFKGTEFWYVDQGIVAAGADADGSGSFRKAVQRQEEKWWLPVPRVPPEGLSENSRKQLNHSRESAGQILKAAMSINSIALSEMEVPESYLESLPKNGRTCLGDFIYRYITSDNLSAVCLLDFLDLSSEHVALEIANRIEAAIYVWRRRAHHKSSPNPYRSTTKYSWGIVKDFMVDGYRRELLADRAENILNSLKHQFPGLTQTTLDTCKIQCNKDVGKSILESYSRVLESIAFNIVARIDDLLYVDDLTKNSDKSELVATSVSTVSQKISHPFSVSVSGTPHKAAFGTPKFSPAPLISPARGEITPFLHNNNKAHRSGLRVRRVLSNYLGVETKTKTCSYPTEVNCSKPE 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00107 572 Gene3D PRONE domain, subdomain 1 97 340 - -
Car06g00107 572 Gene3D PRONE domain, subdomain 1 341 477 - -
Car06g00107 572 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 20 560 IPR038937 GO:0005085
Car06g00107 572 ProSiteProfiles PRONE domain profile. 93 478 IPR005512 GO:0005085
Car06g00107 572 MobiDBLite consensus disorder prediction 1 17 - -
Car06g00107 572 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 106 472 IPR005512 GO:0005085
Car06g00107 572 MobiDBLite consensus disorder prediction 1 55 - -
Car06g00107 572 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 5 20 560 - -
Car06g00107 572 MobiDBLite consensus disorder prediction 18 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00107 Car-Chr6 1322399 1325491 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00107 - - gmx:100796692 809.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00107 06 1322399 1325491 Car02g01658 02 45486698 45490779 PCT