LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Car06g00097	ATGGGTCTTAAGACACAGTTCTCTCTGTTCGCACCAATGAAGTCAACAACAAGGTTCCTCCTCTTAACAAGTTCGCTACTTCTACTAACATGCGCCACACACGTAACATCCGTGACAACATGCCCACCATGTGGCAACACCACCGTACCCTTCCCACTTAGCACCACCGCCACATGCGGCGATCCATTATACAAAATCCGGTGCAGCTCCACCGGAACACTAATATTCGACACACTAAACAACTCCTACCCGATCGAATCAATCGACCCGAAAACCCAACGGTTAGTAATCCAACCCGCTCCACTTATACCTAACACGTGCATAACGACCGATAAGGTTCACCAAGGGATCCAACTTAACAATAGTCTACCTTTCAACATCACGAGTTCAAATACCATTGTTTATCTCAATTGTACCCTCTTGCTTCTCCAATCGCCGTTGAACTGCTCTTCCTCTAGCCTCTGTCATTCTTACATCAACGCAACCGCTTCTGTGTCCACGTGTCAGTCCGGTCCGGTTTGTTGCACTTTCCGAACCGGTGGTTCGAGTACCTCTTATATGATTCGTGTTAGGGATGTCGGTTGTAGTGCTTATTCTAGTTTTGTTAACCTTGATTGGGCTCTTCCTGTGGACCGTTGGTCTAGACCCGGTTTGGAGATTCAGTGGCAGTCGCCTAGAGAAACTGTTTGTGGGTCCCAAACGGATTGTGATTCTGCCACGTCGACTTGTAGGGAAGATGGTTTTTCGTCTAATGGGATCAGAAGGTGTTTCTGTAATGGAGACCTTCTTTGGGACCCTATTCATGGGGTGTGCACTCAAACTCAGTTGTAG	831	0.4753	MGLKTQFSLFAPMKSTTRFLLLTSSLLLLTCATHVTSVTTCPPCGNTTVPFPLSTTATCGDPLYKIRCSSTGTLIFDTLNNSYPIESIDPKTQRLVIQPAPLIPNTCITTDKVHQGIQLNNSLPFNITSSNTIVYLNCTLLLLQSPLNCSSSSLCHSYINATASVSTCQSGPVCCTFRTGGSSTSYMIRVRDVGCSAYSSFVNLDWALPVDRWSRPGLEIQWQSPRETVCGSQTDCDSATSTCREDGFSSNGIRRCFCNGDLLWDPIHGVCTQTQL	276

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Car06g00097	276	Pfam	Wall-associated receptor kinase galacturonan-binding	41	97	IPR025287	GO:0030247
	Car06g00097	276	PANTHER	WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED	17	273	-	-
	Car06g00097	276	PANTHER	WALL-ASSOCIATED RECEPTOR KINASE-LIKE 20	17	273	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Car06g00097	Car-Chr6	1188333	1189163	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Car06g00097	14	273	Receptor kinase-like Gene Family	AT5G02070	43.060	8.54e-62	204

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Car06g00097	-		-	gmx:100305415	414.075