Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00093 ATGAAATCTCCAATGAGTATCGATATTCTTAAAACAACACACGCTCTCAAGATCGTTGCTTTCTTCTTCATCTCTATCAGTTTCTTCTACTTAGGTAAACACTGGTCCGATGGCTACCAACAACTTATCTTCTTCACACAAGACTCCGACCCGGATCCGAATCAAAATCAAGCGGTTTCTATTTCCCCTAATTACAACAAATCATTCAACATCTCTATCCCTATCGGTCAGAATAGCACCGAACCGGTCTCGGAGAAAACCCTAACTCAACCGCCGCCTGCGGGGGATTCGGTGGAGAAATTTGGGATCGTGAATGAGAATGGGACGATGTCGGAGGAGTTTGAGGTTGGGAATTTCGATCCGGAGATGGTGGATGATTGGGTGAACGAAACGCAAGTTGAGAAGGAAGGTTCTGATAGTGTTGCGAAATTCACGATCACGAAGTTTGGGTTGTGTTCGAGGGATATGAGTGAGTATATACCTTGTTTGGATAATGTGGATGCGATTCGGAAGATGCCTTCGACGGAGAAAGGAGAAAAATTTGAACGGCATTGTCCTGAAGAAGGTAAAGGGTTGAATTGTTTGGTTCCTGCACCTAAAGGGTACCGTGCCCCAATTCCATGGCCCAAAAGCAGAGACGAGGTATGGTTCAGTAATGTTCCTCATACTCGTCTTGTTGAAGATAAAGGCGGTCAAAACTGGATTTCTAGAGACAAAGATAAGTTTAAATTTCCAGGAGGTGGTACACAATTTATACACGGGGCAAATGAATACTTGGACCATATTGCTAAGATGATTCCTGAAATTACATTTGGTCAGCATATACGAGTTGCTCTTGATGTTGGCTGTGGTGTAGCTAGTTTTGGTGCGTACTTACTGTCACGGAATGTCGTCACCATGTCCGTAGCTCCCAAGGATGTTCATGAGAATCAGATTCAGTTTGCTCTTGAGCGTGGGGTACCGGCCATGGTGGCAGCATTTGCAACTAGACGTCTTTTATATCCAAGTCAAGCTTTTGACTTGATACACTGTTCACGTTGTAGAATTAATTGGACTCGAGATGATGGGATATTGCTGCTTGAAGTTAATAGGATGCTAAGAGCAGGAGGGTATTTTGTTTGGGCTGCCCAGCCGGTTTATAAGCACGAAGAAGTTTTAGAAGAACAATGGGAAGAGATGCTTAATCTTACCACTCGACTCTGCTGGAATTTTTTGAAAAAAGATGGGTACATTGCAGTATGGCAGAAACCTTTTGACAATAGCTGCTATTTAAACCGTGAAGCAGGAACAAAGCCTCCTCTATGTGACCCAAGTGATGACCCAGACAACGTTTGGTATGTTGATCTAAAAGCATGCATCTCTGAATTGCCTAAAAATGGATATGAAGCAAATGTTACCAATTGGCCTGCACGTATGCAAACCCCACCCAATAGGCTTCAAAGCATAAAACTTGATGCTTTCATATCCCGAAAAGAGCTATTTAAGGCAGAATCAAAATACTGGGATGAGATAATAGAAAGCTATGTCCGTGCTTTGCACTGGAAGAAGATGAAATTAAGAAATGTTATGGACATGCGAGCAGGTTTTGGAGGATTTGCAGCAGCATTGATTGCGCAAAATCTTGATAGCTGGGTTATGAATGTTGTTCCTGTAAGCGGTCCAAACACATTGCCTGTCATATACGACCGTGGATTTATTGGAGTTATGCATGACTGGTGTGAATCATTTGACACCTACCCGAGAACCTATGATTTACTGCATGCTGCAAACTTGCTTTCTGTTGAGAGGAAAAGATGCAATGTCTCATCAATTATGGTTGAGATGGATCGGATACTAAGACCTGGTGGGCGTGTTTACATTCGCGATTCACTTGTCATAATGGATGAACTTCAACAGATTGCCAAGGCAATAGGCTGGCACACGACACTACGAGATACAGCTGAGGGGCCTCATGCAAGTTATAGGATCTTGGTTTGTGATAAGCATCTGCTACGTGCTTGA 2001 0.4313 MKSPMSIDILKTTHALKIVAFFFISISFFYLGKHWSDGYQQLIFFTQDSDPDPNQNQAVSISPNYNKSFNISIPIGQNSTEPVSEKTLTQPPPAGDSVEKFGIVNENGTMSEEFEVGNFDPEMVDDWVNETQVEKEGSDSVAKFTITKFGLCSRDMSEYIPCLDNVDAIRKMPSTEKGEKFERHCPEEGKGLNCLVPAPKGYRAPIPWPKSRDEVWFSNVPHTRLVEDKGGQNWISRDKDKFKFPGGGTQFIHGANEYLDHIAKMIPEITFGQHIRVALDVGCGVASFGAYLLSRNVVTMSVAPKDVHENQIQFALERGVPAMVAAFATRRLLYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFVWAAQPVYKHEEVLEEQWEEMLNLTTRLCWNFLKKDGYIAVWQKPFDNSCYLNREAGTKPPLCDPSDDPDNVWYVDLKACISELPKNGYEANVTNWPARMQTPPNRLQSIKLDAFISRKELFKAESKYWDEIIESYVRALHWKKMKLRNVMDMRAGFGGFAAALIAQNLDSWVMNVVPVSGPNTLPVIYDRGFIGVMHDWCESFDTYPRTYDLLHAANLLSVERKRCNVSSIMVEMDRILRPGGRVYIRDSLVIMDELQQIAKAIGWHTTLRDTAEGPHASYRILVCDKHLLRA 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00093 666 Gene3D Vaccinia Virus protein VP39 255 419 IPR029063 -
Car06g00093 666 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 182 403 IPR029063 -
Car06g00093 666 MobiDBLite consensus disorder prediction 79 98 - -
Car06g00093 666 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 14 664 IPR004159 GO:0008168
Car06g00093 666 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 158 661 IPR004159 GO:0008168
Car06g00093 666 PANTHER METHYLTRANSFERASE PMT12-RELATED 14 664 - -
Car06g00093 666 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 497 639 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00093 Car-Chr6 1144819 1149781 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00093 - - gmx:100800414 1149.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00093 06 1144819 1149781 Car02g01614 02 43929859 43934879 PCT