Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00089 ATGGCAGGTGAAGAGTGCAGTTCCAATTCCAATTCCATCAGAGCTTCAAGATGGTCCCTCGCCGAAATGACGGCTCTCGTCACCGGTGGAACTCGTGGGATTGGgcgtgccatagtggaagatttatgtgggtttggtgccactgtccacacttgttccagaaaccaaactgagctcaATAACTGTTTCGATCAATGGCGTAGTAAAGGCTTTTTGGTTTCTGTTTGTGATGTCTCTTCTCCACCACAAAGAGAGAAGCTCATTCAAGAAGTTACATCAATCTTTAATGGCAAACTTCACATTTATGTGAACAATGTTGGAGTGAACATTAGAAAACCAACCATTGAGTATACTGCTGAAGTATATTCAGAAATTATGTCAACTAATTTAGATTCTGCATATCATCTGTGCCAACTTACACACCCTCTTCTAAAGGCATCTGGAATGGGAAACATTGTGTTCATTTCGTCGATCGCCGGTGTGGTGAGCTTAGGTACTGGATCAGTCTACGCAGCAAGTAAAGCTGCAATCAACCAGCTTACAAAAAATTTGGCTTGTGAATGGGCTAAAGATGGCATAAGGAGCAATTGTGTTGTTCCTGCTACTACCAATACACCACTTGTAGAACATCTGCTTCGCAACAAGCAATATATAGATGAAATGTTGGCTCGAACTCCTCTCGGCCGCATCGCAGAAGCTCATGAAGTTTCATCCTTGGTGGCTTTCCTTTGTCTGCCTGCTGCGTCTTACATCACAGGCCAGGTTATTTGTGTTGATGGAGGATTAACAGTGAATGGATTTCAGCCCAGCATGAGAATAACATAA 825 0.3903 MAGEECSSNSNSIRASRWSLAEMTALVTGGTRGIGRAIVEDLCGFGATVHTCSRNQTELNNCFDQWRSKGFLVSVCDVSSPPQREKLIQEVTSIFNGKLHIYVNNVGVNIRKPTIEYTAEVYSEIMSTNLDSAYHLCQLTHPLLKASGMGNIVFISSIAGVVSLGTGSVYAASKAAINQLTKNLACEWAKDGIRSNCVVPATTNTPLVEHLLRNKQYIDEMLARTPLGRIAEAHEVSSLVAFLCLPAASYITGQVICVDGGLTVNGFQPSMRIT 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00089 274 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 97 108 IPR002347 -
Car06g00089 274 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 158 IPR002347 -
Car06g00089 274 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 170 189 IPR002347 -
Car06g00089 274 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 9 271 - -
Car06g00089 274 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 157 185 IPR020904 GO:0016491
Car06g00089 274 Gene3D - 13 266 - -
Car06g00089 274 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 24 265 IPR036291 -
Car06g00089 274 Pfam Enoyl-(Acyl carrier protein) reductase 31 263 - -
Car06g00089 274 PANTHER TROPINONE REDUCTASE 9 271 IPR045000 GO:0016491
Car06g00089 274 PRINTS Glucose/ribitol dehydrogenase family signature 24 41 IPR002347 -
Car06g00089 274 PRINTS Glucose/ribitol dehydrogenase family signature 97 108 IPR002347 -
Car06g00089 274 PRINTS Glucose/ribitol dehydrogenase family signature 144 160 IPR002347 -
Car06g00089 274 PRINTS Glucose/ribitol dehydrogenase family signature 170 189 IPR002347 -
Car06g00089 274 PRINTS Glucose/ribitol dehydrogenase family signature 191 208 IPR002347 -
Car06g00089 274 PRINTS Glucose/ribitol dehydrogenase family signature 226 246 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00089 Car-Chr6 1098318 1101023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00089 17 269 Miscellaneous Gene Families AT2G29290 62.646 2.47e-115 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00089 K08081 - gmx:100775806 448.358