Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00087 ATGGGACATCTAAAGATGCAAATGCCAACTGGTGTCAATGGAATAGAGGATCAATATGAACAATGTGGTTTTGGATATCCTAACAAAACTACTATAGCATGCATGATCAATGCAGAAATCGGTTCTGTTTTGGCCGTCATGCGAAGAAATGTTAGATGGGGAGTTCATTATATGTCAGATGATGACCAATCAGAGCACTTCCTCGTTCAGTCTTTGAAAACGCTGAGAAGGCAAATTTTCTCATGGCAGAATCCATGGCATTCCATCAATCCTGCCTTGTATCTTCAACCTTTTCTTGATGTGATTCAATCAGATGAAACCGGCGCACCGATTACTGGTGTTGCTCTGTCATCAGTTTACAAGATCTTAACTCTGGACGTGATTGATCAAAGCACCGTCAATGTTGTCGATACTATGGATTTGGTGGTTGATGCTGTCACAAGTTGCAGATTTGAGGTGACTGATCCTGGATCAGAAGAAGTGGTATTAATGAAGATTTTACAAGTTCTTCTAGCATGTGTGAAGAGTAGAGCATCAGTAATACTTAGTAACCAACACATTTGCACCATAGTGAATACTTGCTTCCGTATTGTTCATCAAGCAGGAACCAAAGGGGAGCTGTTGCAGCGGATAGCTCGATACACAATGCATGAACTTGTTAGGTGTATATTCTTTCACCTTCAAGAGATTGACATTGCAGAGCATGCATTGATAAATGGGAGCTCTACTTCAAAACAAGAGACTTGTGAGCTAAATGATGAGCATGCTTCGGCAAGCAGACAATATGAAAATGGGAGCCTGAATTCTGCATATGATGGTCAACCATCATACATGAGCCTTGCTTCCAGAACTTCACCAGTTGTTACAGAAACTGTAATGCCAGAAAACACAACTATTGCTAGCAGTGACAAGGAGAGTGATCTACAAGAATTGCAGCTCATGACTGAACCATATGGAGTTCCCTGTATGGTGGAAATATTTCACTTCTTGTGTTCCTTGTTGAATGTTGTTGAGCATATGGGAATGAATCCTAAATCAAACACACTAACATTTGATGAAGATGTACCTCTTTTTGCCTTAACTTTGATTAATTCAGCCATTGAGTTGGGAGGGCCTTCCTTTCGTCATCACCCCAGATTGCTGAGTTTAATTCAAGATGAAGTGTTCCACATTCTTATGCAATTCGGTTTGTCAATGAGCCCACTCGTACTTTCATTGGTGTGTAGCATTGTTCTCAATTTGTATCACCATCTTCGTACAGAACTCAAATTACAGCTAGAAGCATTTTTTTCTTGTGTTATTTTGAGGCTTGCACAAAGCAAATATGGGGCTTCATATCAGCAACAGGAGGTTTTGATGGAGGCACTTGTCGATTTGTGCAGACAAAAGACATTCATGGTGGAGATGTATGTTAACTTTGATTGTGACATTACTTGCAGTAATGTCTTTGAAGATATTGCTAATTTGTTGTCCAAAAGTGCTTTTCCTGTTAATAATCCATTATCTTCCATGCATATTCTTGCTTTGGATGGTCTTATTGCTGTAGTGCAGGGAATGGCCGATAGGATAGGCAATGGATTTGTCGGTTCGGAAAACTCTCCTGTGAACTTTGAAGAGTACACACCATTCTGGCTGGAACAGTGTGAAAATTTTGGTGATCCAAATGATTGGGTTCCTTTTATCCGCCGAAGAAAGTACTTCAAGAGAAGATTGATGATTGGAGCTGATCACTTCAATCGTGATGCTAAGAAAGGCCTTGAGTTTCTCCAAGGAACACATCTTTTGCCTGACAAACTTGATCCCCAAAGTGTTGCCTGCATTTTGAGATTCACCGCTGGGTTGGATAAGAATGTCATTGGTGATTACTTAGGAAATCATGATGAATTCTGTGTTCAGGTTCTTCGAGAATTTGCTAGAACATTTGATTTCCAAGATATGACCTTAGACACAGCCCTGCGTATATTTTTGGAGACTTTTAGGCTGCCTGGAGAATCACAGAAGATACATAGGGTGCTTGAAGCTTTCTCTGAGAGATATTATGAACAGTCACCGCATATCCTAGCTAACAAGGATGCTGCTCTTGTGTTGTCATACTCAATTATAATGCTTAATACAGATCAGCACAATGTGCAGGTCAAAAAGAAGATGACAGAAGCAGATTTTATCAGGAATAATAGGCTTATAAATGGCGGCAGTGATCTACCTCGAGAATTTCTGTCAGAGATTTACCATTCAATTTGTAAGAATGAAATCCGCACAACCCCTGAATCAGGCTTTGGATCTCCTGGAATGACCCCAAGTCAATGGATTTCTCTAATACACAAGTCGAAAAAAACTGCTCCATACATTGTATCTGATTCCAGAGCATACCTGGATTATGATATGTTTGTTATATTGTCAGGCCCAACAATTGCTGCCGTTTCTGTGGTATTTGATAATGCTGAAAATGAAGAGGTATATCAAACATGTATAGATGGATTCTTAGCTATTGCGAAGATATCAGCTTACTATCATCTTGAAAATGTTCTTGATGATCTGATTGTGTGTCTCTGTAAGTTCTTCACCATTTTGGATCCATTATCAGTTGAGGAATCTGTCCTAGCCTTTGGAGATGACACAAAAGCACGATTGGTAACTGAGACAGTTTTCACTATTGCAAGTAGGTATGGTGATTACATCCGCACCGGGTGGAGGAATATTCTTGATTGCATCTTAAGATTGCACAAGTTAGGTCTTCTTCCTACTCATTTGGCCAGCGATGCAGTTGACGAGTCAGATATTTCTACAGAAACTGGACACGGGAAACTTAAATCAAAATCTTTATCATCAACTCATCTTCATTCTATTAGTACTCCAAAGAGATCCTCAGGGTTATTGAGCAGGTTTAGTCAACTATTATCTCTCAGCACCGACGAGCCAAGAACAATACCAACCGAAGAACAACTGGCCGCTCATCAGCAAGCCGTACAAACAATTCAAAAGTGTCACATCAACAGCATATTCACTGAAAGTAAATTCCTTCAGGCTGAATCCCTATTGCAGCTGGTAAGATCACTCATCATCGCTGGGGCTCAATCTCAGAAGGGGAACAAGATATCTCAAGGTGAAGAATCTTCGGTTTTCTGCCTGGAGTTACTGGTAGCAATCACTCTGAATAACAGGGATAGGATTGGGCTTCTATGGAAGGGTGTTTATGAACACATATTCAATATTGTTAAATCAACTGTGATGCCTTGTGTGCTAGTAGAAAAGGCTGTTTTCGGACTTCTAAGGATTTGCCATCGCTTACTTCCCTATAAAGAGAACATGGCTGATGAACTTTTGAAGTCCCTGCAACTGATCTTGAAGCTTGATGCACTGGTTGCAGATGCATACTACGAGCAGATTACACAGGAAGTCAGTCGCCTTGTTAAGGCAAATGCGTCTCGTATTAGATCTCATTTAGGATGGCGGACAATTACATCGCTTCTTTCTGTCACCGCTAGACACCTGGAAGCATCAGAGGTTGGATTTGCTACGCTTTCGTTCATTATGTCTGATGGAACTCACTTGCTCCCTGCAAATTATATTCTCTGTATAGATGCCGCGAGGCAGTTTGCCGAGTCTCATGTAGGACTGGTGGGTCGGTCCATTGTTTCGCTAGATCTTATGGCAGGTTCTTTTAATTGTTTACAAAAGTGGACTAGTGATGCAAAGCAAGCGGCGAAAGAAGAGGAAGTGGAAAAGATGTTGAAGGATATTGGGGAAATGTGGTTGAGGTTATTACAAGGATTAAGGAAAGTATGCTTGGACCAAAGAGAGGAGGTTCGAAATCACGCGCTGTTATCTTTGCAAAAGTGCATGACAGAAGCTGTTGGGACTCATCTCCCATGTGATTTGTGGTTACAGTGTTTTGATCAGGTGATCTTCACCTTGTTGGATGACCTGCTCGATATTGCTCAGGTGAACTCTCAGAAGAACTACCGAAACATCGAAGAAACGCTGATTCTTGCGTTGAAGCTCTTATTTAAAGTTTTTCTTGAATTACTCAAAGAGCTATCGCAACTGGAAGCCTTCTGCAAACTATGGGTGGGTGTGTTAATCCATGCGGAAAAATATGCGAAGGTGAAAATTAGAGGAAAGAGAAGTGAGAAGCTTCAATTGGTTGTTCCCGAGCTTGTGAAGAATGCGTTGGTCGTTATGAAATCAAAGGGAATACTAGTGGAGAGCAGTGGTTTAGAGGAAAATAGTTTGTGGGAAGTGACATGGCTACATGTGAAGAATATAGATCCCTCATTGCAGTCTGACGTGTTCCAAGAGCACGATTCAGAACAGTTGCAGCAAAAGCAGATTGAAACAGTTGGAGATTTAGAACATGATGCAAACATTTCTGTTCCTTCAAATGAAAAACTTGACCAAGATGGTGCTGGTATTGGTTAA 4419 0.4085 MGHLKMQMPTGVNGIEDQYEQCGFGYPNKTTIACMINAEIGSVLAVMRRNVRWGVHYMSDDDQSEHFLVQSLKTLRRQIFSWQNPWHSINPALYLQPFLDVIQSDETGAPITGVALSSVYKILTLDVIDQSTVNVVDTMDLVVDAVTSCRFEVTDPGSEEVVLMKILQVLLACVKSRASVILSNQHICTIVNTCFRIVHQAGTKGELLQRIARYTMHELVRCIFFHLQEIDIAEHALINGSSTSKQETCELNDEHASASRQYENGSLNSAYDGQPSYMSLASRTSPVVTETVMPENTTIASSDKESDLQELQLMTEPYGVPCMVEIFHFLCSLLNVVEHMGMNPKSNTLTFDEDVPLFALTLINSAIELGGPSFRHHPRLLSLIQDEVFHILMQFGLSMSPLVLSLVCSIVLNLYHHLRTELKLQLEAFFSCVILRLAQSKYGASYQQQEVLMEALVDLCRQKTFMVEMYVNFDCDITCSNVFEDIANLLSKSAFPVNNPLSSMHILALDGLIAVVQGMADRIGNGFVGSENSPVNFEEYTPFWLEQCENFGDPNDWVPFIRRRKYFKRRLMIGADHFNRDAKKGLEFLQGTHLLPDKLDPQSVACILRFTAGLDKNVIGDYLGNHDEFCVQVLREFARTFDFQDMTLDTALRIFLETFRLPGESQKIHRVLEAFSERYYEQSPHILANKDAALVLSYSIIMLNTDQHNVQVKKKMTEADFIRNNRLINGGSDLPREFLSEIYHSICKNEIRTTPESGFGSPGMTPSQWISLIHKSKKTAPYIVSDSRAYLDYDMFVILSGPTIAAVSVVFDNAENEEVYQTCIDGFLAIAKISAYYHLENVLDDLIVCLCKFFTILDPLSVEESVLAFGDDTKARLVTETVFTIASRYGDYIRTGWRNILDCILRLHKLGLLPTHLASDAVDESDISTETGHGKLKSKSLSSTHLHSISTPKRSSGLLSRFSQLLSLSTDEPRTIPTEEQLAAHQQAVQTIQKCHINSIFTESKFLQAESLLQLVRSLIIAGAQSQKGNKISQGEESSVFCLELLVAITLNNRDRIGLLWKGVYEHIFNIVKSTVMPCVLVEKAVFGLLRICHRLLPYKENMADELLKSLQLILKLDALVADAYYEQITQEVSRLVKANASRIRSHLGWRTITSLLSVTARHLEASEVGFATLSFIMSDGTHLLPANYILCIDAARQFAESHVGLVGRSIVSLDLMAGSFNCLQKWTSDAKQAAKEEEVEKMLKDIGEMWLRLLQGLRKVCLDQREEVRNHALLSLQKCMTEAVGTHLPCDLWLQCFDQVIFTLLDDLLDIAQVNSQKNYRNIEETLILALKLLFKVFLELLKELSQLEAFCKLWVGVLIHAEKYAKVKIRGKRSEKLQLVVPELVKNALVVMKSKGILVESSGLEENSLWEVTWLHVKNIDPSLQSDVFQEHDSEQLQQKQIETVGDLEHDANISVPSNEKLDQDGAGIG 1472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00087 1472 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 11 1463 - -
Car06g00087 1472 ProSiteProfiles SEC7 domain profile. 560 749 IPR000904 GO:0005085|GO:0032012
Car06g00087 1472 PANTHER PATTERN FORMATION PROTEIN GNOM PROTEIN 11 1463 - -
Car06g00087 1472 MobiDBLite consensus disorder prediction 934 954 - -
Car06g00087 1472 Pfam Sec7 domain 568 751 IPR000904 GO:0005085|GO:0032012
Car06g00087 1472 Gene3D - 561 643 - -
Car06g00087 1472 SMART sec7_5 564 751 IPR000904 GO:0005085|GO:0032012
Car06g00087 1472 CDD Sec7 568 751 IPR000904 GO:0005085|GO:0032012
Car06g00087 1472 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 321 482 IPR032691 -
Car06g00087 1472 MobiDBLite consensus disorder prediction 932 954 - -
Car06g00087 1472 SUPERFAMILY Sec7 domain 565 753 IPR035999 GO:0005085|GO:0032012
Car06g00087 1472 Gene3D - 644 759 IPR023394 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00087 Car-Chr6 1077370 1084048 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00087 K18443 - gmx:100789674 2343.93