Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00085 ATGGGACGTCTAAAGCTGCAACCGGGTATCAATTCAATAGAGGAGGAGGAACCTGAAGAATGTGATGCTGCCTGTCCTAATAGAACAACTTTATCGTGCATGATAAATTCAGAAGTTGGCGCTGTTTTGGCAGTCATGAGAAGAAATGTGAGGTGGGGAAGTCGTTATATGTCAGGCGATGATCATTTGGAACACACTCTTATTCAGTCTTTCAAGGCATTAAGGAGACAGATCTTTTCATGGAACCACCATCAATGGCAAGCTATCAACCCCACCCTGTATCTACTGCCTTTTCTAGATGTAATTCGGTCTGATGAAACCGGTGCGGCAATTACAGGTGTTGCTTTGTCGTCTGTTTACAAGATCTTGACTCTTGATGTGATTGATCAAAATGCTGTCAATGTTGAGGAGGCCATGCATTTGGTGGTTGATGCTGTCACTAGCTGCAGATTTGAGGTCACTGATTCTTCTTCAGAAGAGGTTGTTTTAATAAAGATACTACAAGTTCTCCTAGCGTGTATGAAAAGTAAAGCGTCTGTAATGCTGAGTAACCAACATGTTTGCACCATAGTGAATACTTGTTTTCGTATAGTTCATCAAGCTGGAAACAAAGGTGAGTCTTTGCAACAGATATCACGGTACACAATGCACGAACTTGTTAGGTGTATTTTCTCCCACCTTCAAGATGTTGACAACACAGACCATGCATTGGTTAATGGAAGCTCTAATTTGAAACAGGAGATTGGAGGCCTAAATAACGAGTATGCTTTTGGAAGTAGAAAGTTGGAGAATGGAAGCATGAGTTCTGAATATGATAATCAGCCGCTACCCACAAACGTTGCTCCAAATGCTGCAAGTGTTGTGACAGTAACTATGATGGATGAAAACACAGCCATAGCTCTTACTGGCAAGGAGGGTGTATCATATGACATGCATCTCATGACTGAACCATATGGTGTTCCTTGTATGGTGGAAATATTTCACTTCTTGTGTTCATTACTGAACGTTACTGAGAATATGGAACTGGGTCCTAGATCAAACACTATAGCATTTGATGAAGATGTACCCCTCTTTGCTTTAACATTAATCAATTCGGCAATAGAACTTGGAGGGCCTTCTATTCACCGTCACCCAAGGTTGCTAAGCTCAATTCAGGATGAGCTTTTTCATAATCTGATGCAATTTGGTTTGTCAGTGAGTCCTCTTATACTTTCAATGGTGTGTAGCATTGTTCTCAATCTGTATCATCATCTTCGTACTGAACTCAAGTTACAACTAGAAGCATTTTTTTCTTGTATCATTTTGAGACTTGCACAAAGCAGATATGGGGCTTCATATCAGCAGCAAGAAGTAGCCATGGAAGCCCTTGTTGACTTCTGCAGGCAAAAGACATTTATGGTTGATATGTATGCTAACTTTGATAGTGACATAACTTGCAGTAATGTCTTTGAAGACCTTGCTAATTTGTTGTCAAGAAGTGCTTTTCCTGTGAACTGTCCATTGTCTGCCATGCATATTCTTGCTTTGGATGGTCTTATTGCTGTTATACAGGGAATGGCCGAAAGGATATCCAATGGATCTGCAAGCTCAGAATATTCTCCAGTGAATCTTGAAGAGTATATTCCATTCTGGATGGTTAAATGTGAAAATTATGGCGATCCAAATCATTGGGTCCCTTTCACCCGCCGCAGAAAGTACATAAAGAGAAGATTGATGATTGGTGCTGACCACTTTAATCGTGATCCTAAGAAAGGTCTGGAGTTTCTCCAGGGAACACATCTTTTGCCTGACAAACTTGATCCCCAAAGTGTTGCTTGCTTTTTCAGATACACTGCTGGGTTGGATAAGAATCTTGTTGGTGATTTTCTTGGGAATCATGATGAATTTTGTGTTCAGGTTCTTCATGAATTTGCCGGAACATTTGATTTCCAAGATATGAACTTAGACACAGCCCTTCGTCTATTTCTGGAGACTTTCAGACTTCCTGGAGAGTCACAAAAGATACATCGGGTGCTTGAAGCTTTCTCTGAGAGATACTATGAACAGTCACCACATATCCTAGCTAACAAGGACGCTGCTCTTGTGTTATCATACTCGATGATAATGCTTAATACAGACCAGCACAATGTGCAGGTTAAAAAGAAGATGACAGAAGATGATTTTATCCGAAATAATAGGCATATAAATGGTGGCAGTGATCTTCCTCGAAAATTCTTATCAGAGATTTACCATTCAATTTGTAAGAATGAAATCCGCACAACCCCTGAACAAGGTGTTGGGTTTCCTGAAATGACACCAAGTCGATGGATCGATCTAATGCATAAATCAAAGAAAACAGCCCCATTTATTGTATCTGGTTCAAAGGCTTACCTTGATCATGATATGTTTGCCATAATGTCTGGCCCAACGATTGCTGCGATCTCTGTTGTATTTGATCATGCCGAACATGAAGAGGTATACCAAACATGTATGGATGGATTCCTAGCTATTGCTAAGATTTCTGCTTGCCATCATCTTGAAGATGTTCTTGATGATCTGGTAGTGTCACTTTGTAAGTTCACTACACTTTTAAACCCATCACTGGTTGAGGAACCAGTCCTTGCCTTTGGAGATGACATGAAAGCAAGAATGGCAACTGTAACAGTATTCACTATTGCAAATAGGTATGGTGATTACATACGCACAGGTTGGAGAAATATTCTTGATTGCATCTTAAGATTGCACAAGCTAGGTCTTCTTCCTGCCCGTGTTGCCAGTGATGCAGCTGATGAGTCAGAGCTTTCTGCTGAAACTGTTCATGGCAAGCCGATTTTGAATTCTTTATCTTCGGCTCATATGCAATCTATTGGCACACCAAGGAGATCCTCCGGATTGATGGGTAGGTTTAGTCAACTCTTATCTCTTGACACTGAGGAGCCAAGATCACAACCTACTGAACAACAACTTGCTGCTCATCAGCGTACTCTTCAAACAATACAGAAGTGTCACATTGACAGCATATTCACCGAGAGTAAATTTCTGCAAGCTAAATCTCTTGAACAGCTTGCAAGGGCGCTTATTTGGGCCGCAGGTCGACCTCAAAAAGTGAACAGCACGCCTGAGGATGAAGATACAGCAGTTTTCTGCCTGGAGTTGCTGATTGCAATCACTTTGAATAACAGGGATAGAATAGCGATTCTCTGGCCGGGTGTATACGACCACATATCAAATATTGTTCAGTCGACTGTAATGCCCTGTGCCTTAGTAGAGAAGGCTGTTTTTGGACTCCTACGGATTTGCCAGCGATTGCTCCCCTACAAGGAAAACATTGCTGATGACCTTTTGAGATCTTTGCAACTTGTCTTAAAGCTTGATGCCCGGGTTGCTGATGCTTACTGTGAACAGATTACTCAGGAAATCAGCCGCCTTGTGAAGGCAAATGCTTCTCACATACGATCCCAGTTAGGATGGCGTGCAATTACGTCACTACTTTCCATCACTGCTAGGCACATAGAAGCATCTGAGGCTGGGTTTGATGCACTTATTTTCATAATGTCTGATGGTGCCCACTTGCTTCCAGCTAATTATGTTATCTGTGTAGACACTGCAAGGCAGTTTGCTGAGTCTCGTGTTGGCCAAGCCGAGCGATCTGTGCGGGCACTAGATCTCATGACAGGGTCTGTCAATTGCTTGACCCAGTGGACTAGTGAGGCTAAGGAAGCAATGGATGAGGAGCAAATGTCTAAGTTGTCCAAGGACATTGGAGACATGTGGTTGATACTAGGACAGGGTCTAAGGAAAGTGTGTTTAGACCAGAGAGAGGAGGGACACTCTCAGAAGGACTACCGCAATATGGAAGGCACCCTTATCTTAGCAGTGAAGCTCTTGTCCAGAGTTTTTCTTCAATTACTCCTAGTTCTATCACAATTAACAACCTTCTGCAAGCTATGGTTAGGTGTACTGACCAGAATGGAAAAATATATGAAGGTGAAGGTTAGGGGGAAAAGAAGTGAGAAGCTTCAAGAAACAGTTCCGGACCTGCTTAAAAACTCGTTGCTTGCTATGAAGATGAGGGGTATACTAGCACAGAGGAGTGCATTGGGTGGTGATAGTCTTTGGGAATTAACTTGGCTTCACGTGAATAACATTTCACCATCATTGCAACTTGAGGTATTCCCAGAGCATGATTCTGAACATTTGCAGCACAAAGAGGGTGAATCAGTAGGAGGTTTGATGCATGATGAAAAGGTTTCTGTTCCTTCAAGTGATATCGCTAGCCGTGAAGACCCTGGCATGATGTATTACGACAAGAAATCTCAGGCAAAGACAGGGCAAGTTCATCTAAAATTACATTTTCATCTGTCTGTCTGGCATTTCCACCTTATCATGTCTTCCATAGAAGCTTCTTGTTAA 4392 0.4196 MGRLKLQPGINSIEEEEPEECDAACPNRTTLSCMINSEVGAVLAVMRRNVRWGSRYMSGDDHLEHTLIQSFKALRRQIFSWNHHQWQAINPTLYLLPFLDVIRSDETGAAITGVALSSVYKILTLDVIDQNAVNVEEAMHLVVDAVTSCRFEVTDSSSEEVVLIKILQVLLACMKSKASVMLSNQHVCTIVNTCFRIVHQAGNKGESLQQISRYTMHELVRCIFSHLQDVDNTDHALVNGSSNLKQEIGGLNNEYAFGSRKLENGSMSSEYDNQPLPTNVAPNAASVVTVTMMDENTAIALTGKEGVSYDMHLMTEPYGVPCMVEIFHFLCSLLNVTENMELGPRSNTIAFDEDVPLFALTLINSAIELGGPSIHRHPRLLSSIQDELFHNLMQFGLSVSPLILSMVCSIVLNLYHHLRTELKLQLEAFFSCIILRLAQSRYGASYQQQEVAMEALVDFCRQKTFMVDMYANFDSDITCSNVFEDLANLLSRSAFPVNCPLSAMHILALDGLIAVIQGMAERISNGSASSEYSPVNLEEYIPFWMVKCENYGDPNHWVPFTRRRKYIKRRLMIGADHFNRDPKKGLEFLQGTHLLPDKLDPQSVACFFRYTAGLDKNLVGDFLGNHDEFCVQVLHEFAGTFDFQDMNLDTALRLFLETFRLPGESQKIHRVLEAFSERYYEQSPHILANKDAALVLSYSMIMLNTDQHNVQVKKKMTEDDFIRNNRHINGGSDLPRKFLSEIYHSICKNEIRTTPEQGVGFPEMTPSRWIDLMHKSKKTAPFIVSGSKAYLDHDMFAIMSGPTIAAISVVFDHAEHEEVYQTCMDGFLAIAKISACHHLEDVLDDLVVSLCKFTTLLNPSLVEEPVLAFGDDMKARMATVTVFTIANRYGDYIRTGWRNILDCILRLHKLGLLPARVASDAADESELSAETVHGKPILNSLSSAHMQSIGTPRRSSGLMGRFSQLLSLDTEEPRSQPTEQQLAAHQRTLQTIQKCHIDSIFTESKFLQAKSLEQLARALIWAAGRPQKVNSTPEDEDTAVFCLELLIAITLNNRDRIAILWPGVYDHISNIVQSTVMPCALVEKAVFGLLRICQRLLPYKENIADDLLRSLQLVLKLDARVADAYCEQITQEISRLVKANASHIRSQLGWRAITSLLSITARHIEASEAGFDALIFIMSDGAHLLPANYVICVDTARQFAESRVGQAERSVRALDLMTGSVNCLTQWTSEAKEAMDEEQMSKLSKDIGDMWLILGQGLRKVCLDQREEGHSQKDYRNMEGTLILAVKLLSRVFLQLLLVLSQLTTFCKLWLGVLTRMEKYMKVKVRGKRSEKLQETVPDLLKNSLLAMKMRGILAQRSALGGDSLWELTWLHVNNISPSLQLEVFPEHDSEHLQHKEGESVGGLMHDEKVSVPSSDIASREDPGMMYYDKKSQAKTGQVHLKLHFHLSVWHFHLIMSSIEASC 1463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00085 1463 Pfam Sec7 domain 568 751 IPR000904 GO:0005085|GO:0032012
Car06g00085 1463 ProSiteProfiles SEC7 domain profile. 560 749 IPR000904 GO:0005085|GO:0032012
Car06g00085 1463 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 1270 1395 - -
Car06g00085 1463 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 11 1267 - -
Car06g00085 1463 SUPERFAMILY Sec7 domain 565 754 IPR035999 GO:0005085|GO:0032012
Car06g00085 1463 SMART sec7_5 564 751 IPR000904 GO:0005085|GO:0032012
Car06g00085 1463 Gene3D - 644 760 IPR023394 -
Car06g00085 1463 PANTHER ARF GUANINE-NUCLEOTIDE EXCHANGE FACTOR GNOM-LIKE 1270 1395 - -
Car06g00085 1463 PANTHER ARF GUANINE-NUCLEOTIDE EXCHANGE FACTOR GNOM-LIKE 11 1267 - -
Car06g00085 1463 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 321 482 IPR032691 -
Car06g00085 1463 SUPERFAMILY ARM repeat 115 1117 IPR016024 -
Car06g00085 1463 CDD Sec7 568 751 IPR000904 GO:0005085|GO:0032012
Car06g00085 1463 Gene3D - 561 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00085 Car-Chr6 1069961 1075294 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00085 K18443 - gmx:100780239 2564.26