Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00082 ATGGCGAAGGCAACAGAAAGCAGTAGCAGAGGCTCAAGATGGTCTCTCAAAGGAGCCACTGCTCTAGTTACCGGTGGAACGCGTGGAATTGGGCATGCTGTGGTGGAGGAACTGGCTGAGTTTGGTGCAACAGTGTACACTTGCTCTAGGAATGAAGTGGAGCTCAATAAATGCTTAAACCAGTGGCAAGAGAAAGGTTTTTCGGTTTATGGATCGGTCTGCGATTTGTCTTCTTCTTCTCAAAGAGAAGAGCTTATTCGAAAAGTTGCTTCTGCTTTCAACGGCAAGCTCAACATACTTGTAAACAATGCTGGAACAAATGTGAGGAAGCCAACAATTGATTATACAGCTGAAGAATATTCAAAAGTCATGAATACTAACTTGGATTCCGTATACCATCTAAGCCAACTAGCATATTCTCTTCTTAAAGAATCTGGAAATGGAAGCATTGTGTTCAATTCCTCTGTTGCATCTCTGACAAGTGTAGGTTCAGGGTCCATCTATGCATTGAGTAAAGCTGCAATCAATCAACTGACCAAAAGTCTTGCTTGTGAATGGGCAAAAGACAACATAAGGAGCAATTGTGTAGCACCCTGGTATACAAAAACATCACTTGTGGAACATTTAATTGCGAACGAAGAGTTTGTGAATGAAATACTATCTCGAACACCGATTAAGCGGATAGCAGAAGCACATGAAGTGTCTTCCTTGGTGACTTTCCTTTGCCTGCCAGCTGCTTCCTACATAACTGGACAGATTGTTTCTGTGGATGGCGGATTTACTGTGAATGGATTTCAACCCAGCATGAGGATTAACTAA 819 0.4237 MAKATESSSRGSRWSLKGATALVTGGTRGIGHAVVEELAEFGATVYTCSRNEVELNKCLNQWQEKGFSVYGSVCDLSSSSQREELIRKVASAFNGKLNILVNNAGTNVRKPTIDYTAEEYSKVMNTNLDSVYHLSQLAYSLLKESGNGSIVFNSSVASLTSVGSGSIYALSKAAINQLTKSLACEWAKDNIRSNCVAPWYTKTSLVEHLIANEEFVNEILSRTPIKRIAEAHEVSSLVTFLCLPAASYITGQIVSVDGGFTVNGFQPSMRIN 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00082 272 PANTHER TROPINONE REDUCTASE 5 268 IPR045000 GO:0016491
Car06g00082 272 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 17 263 IPR036291 -
Car06g00082 272 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 5 268 - -
Car06g00082 272 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 95 106 IPR002347 -
Car06g00082 272 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 156 IPR002347 -
Car06g00082 272 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 187 IPR002347 -
Car06g00082 272 PRINTS Glucose/ribitol dehydrogenase family signature 20 37 IPR002347 -
Car06g00082 272 PRINTS Glucose/ribitol dehydrogenase family signature 95 106 IPR002347 -
Car06g00082 272 PRINTS Glucose/ribitol dehydrogenase family signature 142 158 IPR002347 -
Car06g00082 272 PRINTS Glucose/ribitol dehydrogenase family signature 168 187 IPR002347 -
Car06g00082 272 PRINTS Glucose/ribitol dehydrogenase family signature 189 206 IPR002347 -
Car06g00082 272 PRINTS Glucose/ribitol dehydrogenase family signature 224 244 IPR002347 -
Car06g00082 272 Gene3D - 2 265 - -
Car06g00082 272 Pfam Enoyl-(Acyl carrier protein) reductase 27 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00082 Car-Chr6 1034626 1036772 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00082 13 267 Miscellaneous Gene Families AT2G29290 60.700 1.01e-114 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00082 K08081 - gmx:100819646 435.261