Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00079 ATGGCTGCCTCAGTCTCCACTGTAGGAGCTGTCAAAACTCCTTTGAGCTTGAATGGTTCAGTAGTAGCTGGACCTTCAGTTTCCAATTCAGCTTTCTTTGGCACAAGCTTGAAAAAGATAACCTCAAGACTTCCAAACACAAAGGTAAATTCGAGTGGAAGCTTAAAAATAGTTGCTGCAGAGACTGAAGGAGGAAAAGAGAAAAAACCAGACAGATGGAAGGGTCTTGCCTATGATATTTCAGATGACCAACAAGACATCACAAGGGGAAAGGGTATGGTTGATTCAGTTTTCCAAGCTCCACAAGATGCTGGAACTCACTATGCTGTCATGAGCTCTTATGAATATATTAGCACTGGACTTCGCCAGTACAACTTTGACAACACCATGGATGGATTTTACATTGCTCCTGCTTTTATGGACAAGCTTGTTGTTCACGTCACTAAAAATTTCATGACCTTGCCCAACATTAAGGTTCCTCTCATTCTTGGTATTTGGGGAGGCAAAGGACAAGGAAAATCTTTCCAATGTGAGCTTGTCTTTGCCAAGATGGGAATCAACCCCATCATGATGAGTGCTGGAGAGCTAGAAAGTGGAAATGCAGGAGAGCCAGCAAAATTGATCAGACAGAGATACCGTGAAGCTGCTGATATAATCAAGAAGGGAAAGATGTGTGTTCTATTCATCAACGATCTTGATGCAGGAGCTGGTCGTATGGGTGGAACAACACAATACACTGTCAACAACCAAATGGTGAATGCCACACTCATGAACATTGCTGATAACCCCACAAATGTCCAACTCCCTGGTATGTACAACAAGGAAGATAACCCTCGTGTCCCCATCGTCGTCACCGGTAACGATTTCTCAACATTGTATGCTCCTCTCATCCGTGACGGTCGTATGGAGAAGTTCTACTGGGCTCCAACAAGAGATGACCGTGTCGGTGTCTGCAAGGGAATTTTTCGCCACGACAATGTTCCCGTCGATGACATTATCAAGATTGTTGACACCTTTCCCGGCCAatccatcgATTTCTTTGGAGCATTGAGGGCTAGAGTGTATGATGATGAAGTGAGGAAGTGGATTTCTGGTGTTGGTGTTGAAACAATTGGGAAGAAGCTTGTGAACTCAAAGGAAGGGCCTCCAACATTTGAACAGCCAAAGATGACAGTGGAGAAACTCTTGGAATATGGTAACATGCTTGTCCAAGAACAAGAGAATGTGAAGAGAGTTCAATTGGCAGACAAGTACTTGAGTGAGGCTGCTCTTGGTGATGCTAATCAAGATGCTATTAAGAGAGGAACTTTCTAA 1314 0.4346 MAASVSTVGAVKTPLSLNGSVVAGPSVSNSAFFGTSLKKITSRLPNTKVNSSGSLKIVAAETEGGKEKKPDRWKGLAYDISDDQQDITRGKGMVDSVFQAPQDAGTHYAVMSSYEYISTGLRQYNFDNTMDGFYIAPAFMDKLVVHVTKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCVLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRHDNVPVDDIIKIVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVETIGKKLVNSKEGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANQDAIKRGTF 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00079 437 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 131 332 IPR027417 -
Car06g00079 437 Gene3D - 125 309 IPR027417 -
Car06g00079 437 PANTHER ATPASE, AAA-TYPE, CORE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 1 437 - -
Car06g00079 437 Pfam ATPase family associated with various cellular activities (AAA) 165 306 IPR003959 GO:0005524|GO:0016887
Car06g00079 437 PANTHER - 1 437 IPR044960 -
Car06g00079 437 Gene3D - 310 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00079 Car-Chr6 1002118 1005939 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00079 - - gmx:100789921 768.844