Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00077 ATGAGTTCGAATCTTGAACCGGTGGCAATTACACCACAAAAACATGACCCAGCTTGGAAGCATGCTCAGTTGTTTAAGAATGGAGACAAAGTGCAGTTGAAGTGCAtatattgtctcaaaatgttcaaaggtggtgggattcataggtttaaggaacaccttgcttgtcagaaagggaatgcttccatgtgcagtagtgtccctcctgatgttaggcttcttatgcAGCAAAGTTTGGATGGTGTTGTGGTGAAAAAGAGAAAGAGGCAGAAAATTGAGGATGAGATTATGAATGTTAATCCTTTGGCTACTGTTGTGAATGCTCCTTCTAATCTGGGGGTGCAGTCTATTGGAGTTCAGGATTCAATGGAACAAAATTCAGGTCATATGTTGAATTCTCCTGGTGATGGAATGGGTAGAAATCTTGAAAGAAGGAAGAAGATTAGAGCTACTAAGAATCCTGCTACAGTTTATACAAATACTGAGTCTGAGGGTGTTGTTCCTATGGAGAAAAATACATTGTTCTCcaaaaagatagacagtcacattcatatggcaataggtcggtttttgtatgatattggtgcgccttttgatgcagtgaactcaatctattttgagcaaatggttgaagcaattgcttccgggggttcaggttttcaacgcccctcgcatcatgaacttcgaggttgggtcctgaaaaactctgtggaagaggtgaagaatggaatcgataggggcaagatgacttgggggagaactggatgttccattttggttgaccaatggactacagaagctggcagaatactaataagttttttggcttattgtcctgaaggcacagtctttctgaaatccttggatgcaactgagatatcgacttctgcagaatttttatatgaattgataaaacaagtagtagaagaagttggagttgggcaagttgtccaagtgattacatcaggcgaagaacagtatgctgttgctgggaaaaggctgactgatacttatcctaacctttattggagcgcgtctgcagctcattgcattgatttgatacttgaagattttggaaatcttgagtggattagtacagtaattgaacaagctaaatctataacaagatttgtctacaattacactgcaattttgaatatggtcagaaggtatactttagggaatgatattgtggatccgtcttattcacgcttcacaacaaactttaccacattaaaacgaatggtcgatcttaaacacaatttacaggctatggttacttctcaggaatggatggattgtccatattcaaagaaaacaGCAGGTTTGGAAATGTTGGATTGCCTGAGCAATCAAACATTTTGGTCGTCGTGCGAAATGATTGTTCGTCTGACACTTCCTCTCTTGAGAATTCTGAGAATAGCTTCCagtgagacgagacctgcaatgggatacacttatgctggaatgtacaaggcaaaagaagcaattaagaaagcacttgtgaaaagggaggattatatggtgtattggaatattatacatcagagatgggagaggctgtggcatcatcctcttcaagctgcaggcttctttcttaatccgaagttcttctatagcattcaaggggatatacacaacgagattctctcggggatgtttgattgcatagagagattgataccagatacaagagttcaagataaaattatcaaagagttaaacctgtacaaatcggctgcaggagactttggGAGAAAGATGGCAATCAGAGCTAGAGATAATCTTCTTCCTTctgaatggtggtcaacatatggaggaggctgccctaacttgtcacgcttagcaattcgcattcttagccaaacatcgagtgtgatattctgcaagagaaaccaaattccttttgaacagataatcaatacaaggaattatatagagcgtcaacatctcactgatctcgtctttgttcattacaacttacgattgaggcaaatGTTTATGAGTAAGGAACAAGAATCTAGCGATCCCCTATCGTTTGACAACATTTGTAACGTTGAAGACTGGATCAGGCCAAGGGATTTATACTTAGAAGAGTATGGGAACTCGGATTGGATGACATTGGATTCTTCTTCCATGAACACAATGCTTTTAAGGCCTTTAGACGATGAAGCTGAAGAAATTGTTGAAGGGTTTGATGATCAAGAGATTTTCAGTAGTCTAAAAGACGACGAGGGTGAGACTACTGGAGACAAGTTTGAAAACCATTAG 2271 0.1471 MSSNLEPVAITPQKHDPAWKHAQLFKNGDKVQLKCIYCLKMFKGGGIHRFKEHLACQKGNASMCSSVPPDVRLLMQQSLDGVVVKKRKRQKIEDEIMNVNPLATVVNAPSNLGVQSIGVQDSMEQNSGHMLNSPGDGMGRNLERRKKIRATKNPATVYTNTESEGVVPMEKNTLFSKKIDSHIHMAIGRFLYDIGAPFDAVNSIYFEQMVEAIASGGSGFQRPSHHELRGWVLKNSVEEVKNGIDRGKMTWGRTGCSILVDQWTTEAGRILISFLAYCPEGTVFLKSLDATEISTSAEFLYELIKQVVEEVGVGQVVQVITSGEEQYAVAGKRLTDTYPNLYWSASAAHCIDLILEDFGNLEWISTVIEQAKSITRFVYNYTAILNMVRRYTLGNDIVDPSYSRFTTNFTTLKRMVDLKHNLQAMVTSQEWMDCPYSKKTAGLEMLDCLSNQTFWSSCEMIVRLTLPLLRILRIASSETRPAMGYTYAGMYKAKEAIKKALVKREDYMVYWNIIHQRWERLWHHPLQAAGFFLNPKFFYSIQGDIHNEILSGMFDCIERLIPDTRVQDKIIKELNLYKSAAGDFGRKMAIRARDNLLPSEWWSTYGGGCPNLSRLAIRILSQTSSVIFCKRNQIPFEQIINTRNYIERQHLTDLVFVHYNLRLRQMFMSKEQESSDPLSFDNICNVEDWIRPRDLYLEEYGNSDWMTLDSSSMNTMLLRPLDDEAEEIVEGFDDQEIFSSLKDDEGETTGDKFENH 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00077 756 MobiDBLite consensus disorder prediction 734 756 - -
Car06g00077 756 Pfam BED zinc finger 16 56 IPR003656 GO:0003677
Car06g00077 756 Pfam hAT family C-terminal dimerisation region 573 661 IPR008906 GO:0046983
Car06g00077 756 SUPERFAMILY Ribonuclease H-like 256 663 IPR012337 -
Car06g00077 756 PANTHER OSJNBA0013A04.12 PROTEIN 7 729 - -
Car06g00077 756 ProSiteProfiles Zinc finger BED-type profile. 13 71 IPR003656 GO:0003677
Car06g00077 756 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 7 729 - -
Car06g00077 756 Pfam Protein of unknown function (DUF 659) 223 374 IPR007021 -
Car06g00077 756 MobiDBLite consensus disorder prediction 736 756 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00077 Car-Chr6 985025 987612 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00077 - - aprc:113850304 1289.63