Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00075 ATGACTACTTCCTCGCATCACTTCATTTTCTTCTGCTTTCTACTCTCCATCTCTGTCTCAGGTGTTGTTACATATGGAAAAGGGATTCAACTGATAATAGTAAACAATTGCAAAGAGAGTGTATGGCCAGGAATTCTTAGCAATGGAGGACAGCCTTCAATTAAAGAGGGTGGATTTCACCTCCCAAGCGGGGAAGAAATTGTTCTCCAAGTTCCAAACAAATGGTCAGGTAGAATATGGGGTAGACAAGGATGTTGGTTCGATGAAACAACGGAAAAAGGTTTATGTCAAACCGGAGACTGTGGAGGGGTTTTGAAATGCAGGGGAGTAGGTGGTGTCCCTCCGGCTACACTTGTAGAAATGACACTTGGAACATCTCAATCAGCTATGCATTACTATGATGTTAGTTTGGTGGACGGTTTTAACCTTCCAATGTCAATGAAACCAGTtggtggtggtggtggtggtggttgtggtgttgCTTCTTGTGAAGCTGATTTGAATGCTTGCTGTCCATCTTCACTTGTTGTAAAACATGATGGAAAAGTTGTGGGATGTAAAAGTGCTTGTTTGGCTACAAAATCAGACAAGTATTGTTGTAGTGGGGAATTTGCTGATCCAAATATTTGCAAGCCAACTTTGTTTGCTCGTGTTTTTAAGACAGTTTGTCCTCGTGCTTATAGTTATGCTTATGATGATTCAACTTCCCTTATGACTTGTTTGGCAAAACGTTATGCCATTACATTTTGCCCTGCATGA 759 0.39 MTTSSHHFIFFCFLLSISVSGVVTYGKGIQLIIVNNCKESVWPGILSNGGQPSIKEGGFHLPSGEEIVLQVPNKWSGRIWGRQGCWFDETTEKGLCQTGDCGGVLKCRGVGGVPPATLVEMTLGTSQSAMHYYDVSLVDGFNLPMSMKPVGGGGGGGCGVASCEADLNACCPSSLVVKHDGKVVGCKSACLATKSDKYCCSGEFADPNICKPTLFARVFKTVCPRAYSYAYDDSTSLMTCLAKRYAITFCPA 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00075 252 Pfam Thaumatin family 35 251 IPR001938 -
Car06g00075 252 Gene3D Thaumatin 30 251 IPR037176 -
Car06g00075 252 CDD TLP-PA 30 250 - -
Car06g00075 252 PRINTS Pathogenesis-related protein signature 30 42 IPR001938 -
Car06g00075 252 PRINTS Pathogenesis-related protein signature 78 89 IPR001938 -
Car06g00075 252 PRINTS Pathogenesis-related protein signature 131 147 IPR001938 -
Car06g00075 252 PRINTS Pathogenesis-related protein signature 241 250 IPR001938 -
Car06g00075 252 PANTHER OS03G0233200 PROTEIN 3 252 IPR001938 -
Car06g00075 252 SMART tha2 31 251 IPR001938 -
Car06g00075 252 PIRSF PR5 1 252 IPR001938 -
Car06g00075 252 SUPERFAMILY Osmotin, thaumatin-like protein 30 251 IPR037176 -
Car06g00075 252 ProSiteProfiles Thaumatin family profile. 31 252 IPR001938 -
Car06g00075 252 PANTHER PATHOGENESIS-RELATED THAUMATIN FAMILY PROTEIN 3 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00075 Car-Chr6 981424 982466 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00075 9 251 Receptor kinase-like Gene Family AT5G38280 39.516 7.11e-51 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00075 - - gsj:114381056 384.415