Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00073 ATGAAAGCACTCTCCTTCCACCATGTTTTTCTCCTAGTTCATCCTCTTACGATTACCCTTTTCATCATGTTCCTTCAAATCCAAACAAACACTTATTGTCTCTCATCTCCTCTCATAATGCCTTTAAAGGTCCAAACACTCCCACATGGAACAATTTCACTTAAAAAAACTCCATCCTCACGCAAACTCTCTTTCCATCACAATGTAACATTAACAGTATCACTAACAGTAGGCTCACCCCCACAGAACGTTACCATGGTCCTCGACACAGGGAGTGAACTCTCATGGCTACACTGCAAAAAGCTTCCAAATTTAAACTCCATTTTCAACCCAATCCTCTCTTCTTCATACACCCCTATACCCTGCACCTCACCCGTTTGTAAAACCCGAACCCGAGACTTCCCTGTACCCGTTTCATGCGACCCGAATAAACTCTGCCACGCTACTATCTCCTACGCCGACGCTTCTTACATCGAAGGCAACCTCGCCATGGAGACGTTTTTCGCCGGCGGGTTGGCACAACCCGGAACTATATTCGGGTGTATGGATTCCGGGTTCAGTACAAACACAAATGAAGACTCGAAAACAACCGGGTTAATGGGTATGAACCGCGGGTCACTCTCGTTTGTGACACAATTGGGGTTACCCAAATTCTCGTATTGCATCTCCGGCAATGATTCCTCCGGCGTGTTACTCTTCGGCGACGCGAATTTCGGTTGGCTGGGACCGTTGAAATACACGCCACTCGTGAAAATGACAACCCCGTTACCGTATTTCGATCGGGTAGCATACACGGTTCAACTCGAAGGAATTCGGGTCGGGAAAAAGAATCTTCAGCTACCAAAATCGATTTTATCACCGGATCATACCGGGGCGGGTCAAACCATGGTAGATTCGGGTACACAATTTACGTTTCTTTTGGGACCAGTTTACACCGCTTTGAGAGAAGAATTCGTTGCTCAGACGAAAGGGGTGTTGACCCTTTTGGAAGACACGAATTTCGTGTTCCAAGGAGCTATGGATTTGTGTTATCGAGTTGGGTCGGGTTCGGGTCGGATAGGTCTTCCGCCGTTACCGGCGGTGACGCTTGTGTTTGAAGGGGCGGAGATGAGTGTTTCAGGGGAGAGGCTGTTGTATAAAGTTGGTGACGTGGCAAAGTGGAAAAATGATTCTGTGTATTGTTTCACGTTTGGGAACTCTGACTTGTTGGGAATTGAGGCTTATGTAATTGGACATTATCATCAAATGAACGTGTGGATGGAGTTTGATTTAGTCAACTTTAGGGTTGGATTTGTTGATACTAGTTGTGAACTTGCAAGTCAACGATTAGGGATGGCTCCTTAA 1344 0.4628 MKALSFHHVFLLVHPLTITLFIMFLQIQTNTYCLSSPLIMPLKVQTLPHGTISLKKTPSSRKLSFHHNVTLTVSLTVGSPPQNVTMVLDTGSELSWLHCKKLPNLNSIFNPILSSSYTPIPCTSPVCKTRTRDFPVPVSCDPNKLCHATISYADASYIEGNLAMETFFAGGLAQPGTIFGCMDSGFSTNTNEDSKTTGLMGMNRGSLSFVTQLGLPKFSYCISGNDSSGVLLFGDANFGWLGPLKYTPLVKMTTPLPYFDRVAYTVQLEGIRVGKKNLQLPKSILSPDHTGAGQTMVDSGTQFTFLLGPVYTALREEFVAQTKGVLTLLEDTNFVFQGAMDLCYRVGSGSGRIGLPPLPAVTLVFEGAEMSVSGERLLYKVGDVAKWKNDSVYCFTFGNSDLLGIEAYVIGHYHQMNVWMEFDLVNFRVGFVDTSCELASQRLGMAP 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00073 447 SUPERFAMILY Acid proteases 71 436 IPR021109 -
Car06g00073 447 Pfam Xylanase inhibitor C-terminal 263 432 IPR032799 -
Car06g00073 447 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 86 97 IPR001969 GO:0004190|GO:0006508
Car06g00073 447 PANTHER ASPARTYL PROTEASE-RELATED 18 445 IPR001461 GO:0004190|GO:0006508
Car06g00073 447 Gene3D Acid Proteases 63 234 IPR021109 -
Car06g00073 447 Pfam Xylanase inhibitor N-terminal 73 235 IPR032861 -
Car06g00073 447 ProSiteProfiles Peptidase family A1 domain profile. 71 432 IPR033121 -
Car06g00073 447 PRINTS Pepsin (A1) aspartic protease family signature 77 97 IPR001461 GO:0004190|GO:0006508
Car06g00073 447 PRINTS Pepsin (A1) aspartic protease family signature 234 247 IPR001461 GO:0004190|GO:0006508
Car06g00073 447 PRINTS Pepsin (A1) aspartic protease family signature 295 306 IPR001461 GO:0004190|GO:0006508
Car06g00073 447 CDD pepsin_A_like_plant 70 436 IPR034161 -
Car06g00073 447 Gene3D Acid Proteases 242 441 IPR021109 -
Car06g00073 447 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 18 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00073 Car-Chr6 962226 964114 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00073 54 314 Miscellaneous Gene Families AT1G44130 26.523 1.27e-15 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00073 - - gmx:100783835 676.781