Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00069 ATGCCTTTCATTTCTAAAATTGAACGCCAAACCGATTACAATCTCTTCGATTCATCCATTCCCATCGTAATCGACAATGGCGCCTCCTATTTCCGTATTGGATGGGCTGGTGAGACTGAACCCCGTGTTGTTTTCCGCAACATTGTCCAAAGGCCACGCCTTAAAGCCACTGGAGAAACTGTCACCATTGTTGGTGACCATGATCCTGCATTATTGAAGTACTTTGATTGTACTCGCTCTGGACCACGCTCGGCATTTGACAGCAATGTTGTTTACCAATTTGAAATAATGGAATATATTCTGGACTTTGCTTTTGACCGGTTGGGTGCAACAGGATCAAAGattgatcatcctatcctgatcACAGAATGTGTATGCAACCCAGTTCAGTCTCGAAGTAAAATGGGAGAACTTCTTTTTCAGACTTATGGAGTTCCATCAATAGCCTTTGGTGTTGATGCAGCATTTAGCTATAAATATAATCAACAACGAGGTGTTTGTGATAAAGATGGTCTTGCTATGTGTCCTGGATTCAATACAACCCATGTGATTCCGTTCGTTGATGGGGAGCCTATTTATAAAGGAAGCTGTCGTAGTAATATTGGTGGATTCCATGTGACTGATTATTTAAAGCAACTTCTTTCACTTAAATATCCTTATCATATGGCTAGATTTACATGGGAAAAGGTTGAAGACCTGAAGATGGAACATTGTTATATTGCACCCGACTATCTTTCTGAAGCTCAACTGTTTCAGCAAGGGGCCAAGGAGGCTGAAGAAAAAACAAGAATGTGGCAGCTCCCATGGGTGCCGCCCCCAACTGAGGAGCCTCCTTCTGAGGAAGAAATTGCAAGAAAGGCAGCAATAAGAGAGAAACAAGGTCAAAGGTTGCGAGAAATGGCGGAGGCAAAGAGGTCGTCCAAAATAAATGAGCTGGAAAATGAATTGCATGGTTTGGAATTTCTTTTGAATCAACTTGCACATGTTCAAGAGAGCAATGTACCATCTTTCTTAGCAGAGACCGGCTATGTCTCTAGGCAGGAAATAGAATCTGCCCGTAGTAAAGTTGTGCAATCATTACGGAAAGCAAAAGGTGAATCAAAGAGTGACCAAGCTGAGATTGAAAAGGCTGACTCTGCCACTAATGAGAAGTATTCTCTTATAAACATCCCCGATGACATGCTGACTGCAGACCAGCTTGTTGAAAAGAGGAAACAGTTGTCAATCAAATCTATGTCTGAAGGGAGGCAGCGATTAAAACAGAAGCGCTATGAAGAGGGGCTGGAAAGAGAGAGGAAACAACAACTAGAGGAGGAGAAGCGCCTGGAGAACCCAGAACTTTACTTGGAACAATTGCGTTCCAGATACAAGGACCTTTCAGAGAAAATTGACCAACGCAAACGGCTCAAGACAAATGGAGGCTCCACAAATGGAAATGGTTTGGCGGGTAGTGTTGGTCGTGGCGAGAGACTCAATGCTGCTCAAAGGGAGAGAATGCGCCTCCTGACAACTGCTGCCTTTGATCGTGGTAAGGGCGAGGATACATTTGGTGCCAAAGACGAAGATTGGCAACTTTACAAATTGATGAGCAAAGATAATGACGACGACGATGAGGAACCGGATGAAGATAACACAGAGCTAGCTCGCATCTCTTCAAGGCTCCAGCTCTTGGATCCAACATTTGTGCCCAAAGTAGAAACGGGTAGCTCCCAACCTGCTGAGGCGCCACGCACTCGTCCACTCACGAAAGAAGATTTTCAAATTGTTTTCGGTGTTGAAAGGTTTAGGTGCCCTGAAATTTTGTTCAGTCCAAACTGGATTGGGGTTGATCAGGTGGGATTAGATGAGATGGCCGGGGTCTCGATGAGAAGGTTATCATGTAAGGACGAAAAGCTCGAAGAGAGGCTGACTAATTCCATACTTGTGACTGGTGGGAGTTCACTTTTCCCTGGCATCATTGAACGCCTCGAAGCTGGAATTCGGATGATTAGACCCTGTGGTTCACCTATTAAAATAGTTAGAGCACTTGATCCGGTTATGGATGCATGGCGTGGGGCGTCTGCTTATGCATCGGCCCCAGGTTTCCACACACAAACATTCACTAGGATGGATTATGATGTAAATGGCGAAGACTGGCTTCGTAGTTATCAACTAAAATATTCGTTGTAA 2169 0.4394 MPFISKIERQTDYNLFDSSIPIVIDNGASYFRIGWAGETEPRVVFRNIVQRPRLKATGETVTIVGDHDPALLKYFDCTRSGPRSAFDSNVVYQFEIMEYILDFAFDRLGATGSKIDHPILITECVCNPVQSRSKMGELLFQTYGVPSIAFGVDAAFSYKYNQQRGVCDKDGLAMCPGFNTTHVIPFVDGEPIYKGSCRSNIGGFHVTDYLKQLLSLKYPYHMARFTWEKVEDLKMEHCYIAPDYLSEAQLFQQGAKEAEEKTRMWQLPWVPPPTEEPPSEEEIARKAAIREKQGQRLREMAEAKRSSKINELENELHGLEFLLNQLAHVQESNVPSFLAETGYVSRQEIESARSKVVQSLRKAKGESKSDQAEIEKADSATNEKYSLINIPDDMLTADQLVEKRKQLSIKSMSEGRQRLKQKRYEEGLERERKQQLEEEKRLENPELYLEQLRSRYKDLSEKIDQRKRLKTNGGSTNGNGLAGSVGRGERLNAAQRERMRLLTTAAFDRGKGEDTFGAKDEDWQLYKLMSKDNDDDDEEPDEDNTELARISSRLQLLDPTFVPKVETGSSQPAEAPRTRPLTKEDFQIVFGVERFRCPEILFSPNWIGVDQVGLDEMAGVSMRRLSCKDEKLEERLTNSILVTGGSSLFPGIIERLEAGIRMIRPCGSPIKIVRALDPVMDAWRGASAYASAPGFHTQTFTRMDYDVNGEDWLRSYQLKYSL 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00069 722 Gene3D - 682 710 - -
Car06g00069 722 MobiDBLite consensus disorder prediction 531 550 - -
Car06g00069 722 MobiDBLite consensus disorder prediction 412 439 - -
Car06g00069 722 CDD NBD_sugar-kinase_HSP70_actin 22 202 - -
Car06g00069 722 Gene3D - 612 681 - -
Car06g00069 722 Gene3D - 152 206 - -
Car06g00069 722 MobiDBLite consensus disorder prediction 561 580 - -
Car06g00069 722 Gene3D Actin; Chain A, domain 2 49 85 - -
Car06g00069 722 Coils Coil 449 469 - -
Car06g00069 722 Gene3D Actin; Chain A, domain 4 517 611 - -
Car06g00069 722 SMART actin_3 19 718 IPR004000 -
Car06g00069 722 Pfam Actin 20 268 IPR004000 -
Car06g00069 722 Pfam Actin 587 714 IPR004000 -
Car06g00069 722 Coils Coil 309 329 - -
Car06g00069 722 MobiDBLite consensus disorder prediction 466 486 - -
Car06g00069 722 Gene3D Actin; Chain A, domain 4 207 261 - -
Car06g00069 722 PANTHER ACTIN 17 714 IPR004000 -
Car06g00069 722 PANTHER ACTIN-RELATED PROTEIN 5 17 714 IPR027664 -
Car06g00069 722 SUPERFAMILY Actin-like ATPase domain 171 715 IPR043129 -
Car06g00069 722 Gene3D - 22 150 - -
Car06g00069 722 SUPERFAMILY Actin-like ATPase domain 20 159 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00069 Car-Chr6 889286 895755 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00069 588 709 Miscellaneous Gene Families AT2G42100 34.426 1.50e-15 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00069 K11672 - gmx:100808396 1261.51