Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00068 ATGGAGTCACCACAAGCAAGAAAATCAGGGATAAACCTACCAGCTGGAATGTCCAGCATAACCTCACTCCGCCTGGAAACATGTTCAACTACACCATCATCAGCTTCACCGCGTGCAATCTCAAATCTCTCATCAGTATCATCACCTTCAAAATCTTCATCTTGTAGTGACAGATTCATACCCTGTAGATCATCTTCCAGACTCCACACATTCGGATTAATCGACAAACCATCGCCTGTTAAAGAAGGGAGTAACGAGGCTTATTCGAGGTTGTTGAAATCGGAGCTTTTTGGATCTGATTTCGCTTCTCCTTCTTCTCCTGCAGGTTGTGGTGTTCCCGGTGTTCAAAAATCTGAACCTATGATGAGTCCTAGTAAGAATATGCTAAGGTTTAAGACGGATCATTCTGGTCCTTCTTCGCCTTTTTCCCCTTCGGTTTTAGGTCATCATTCTGCTTTCTCTTCCGACTGTTCTACTCCTCCTAAGCCTCCTAGGAAAGTCCCCAAGACACCTCACAAGGTTCTGGATGCTCCTTCACTTCAAGATGACTTTTATTTGAATCTTGTGGACTGGTCCTCACAAAATACTCTAGCAGTGGGGCTTGGCACTTGTGTTTATCTTTGGAATGCTTCAAACAGCAGAGTGACTAAGCTGTGTGACTTAGGGCCTTATGATGGTGTCTGTTCTGTCCAGTGGACCAGGGAAGGTTCTTTCATATCTATTGGTACAAACCTTGGTCAAGTTCAGATTTGGGATGGTACTCAATGCAAAAAGGTCAGAACAATGGGAGGGCATCAAACAAGAACGGGTGTCTTGGCATGGAATTCTCGCATTTTGGCTTCAGGAAGCAGAGATAGAAACATACTTCAGCATGACATGAGGGTTTCAAGTGACTTTGTCGGAAAGCTTGTTGGCCACAAGTCTGAGGTATGTGGATTGAAATGGTCCTGTGATGACAGAGAACTTGCTTCTGGTGGTAATGATAATCAGCTTTTGGTATGGAATCAGCACTCTCAGCAACCAACTTTAAGACTTACAGAGCACACTGCCGCGGTGAAGGCCATTGCTTGGTCACCTCACCAGAGCAACCTCCTTGTGTCTGGAGGTGGAACTGCTGATAGATGCATTCGTTTCTGGAACACTACAAATGGCCACCAATTGAACTCTGTTGACACTGGAAGCCAGGTTTGTAACCTTGCTTGGAGTAAAAATGTGAATGAGCTAGTAAGTACTCATGGTTACTCACAAAATCAAATCATGGTGTGGAAATATCCATCACTAACAAAGGTTGCAACTCTAACTGGACACAGCATGAGAGTACTATACCTTGCAATGTCTCCTGATGGTCAGACAATAGTGACTGGTGCTGGGGATGAAACGCTGCGGTTTTGGAATGTTTTCCCATCAGTTAAAACACCTACCCCAGTTAAAGATACAGGCCTTTGGTCACTGGGCCGAACCCAAATTCGATGA 1473 0.4467 MESPQARKSGINLPAGMSSITSLRLETCSTTPSSASPRAISNLSSVSSPSKSSSCSDRFIPCRSSSRLHTFGLIDKPSPVKEGSNEAYSRLLKSELFGSDFASPSSPAGCGVPGVQKSEPMMSPSKNMLRFKTDHSGPSSPFSPSVLGHHSAFSSDCSTPPKPPRKVPKTPHKVLDAPSLQDDFYLNLVDWSSQNTLAVGLGTCVYLWNASNSRVTKLCDLGPYDGVCSVQWTREGSFISIGTNLGQVQIWDGTQCKKVRTMGGHQTRTGVLAWNSRILASGSRDRNILQHDMRVSSDFVGKLVGHKSEVCGLKWSCDDRELASGGNDNQLLVWNQHSQQPTLRLTEHTAAVKAIAWSPHQSNLLVSGGGTADRCIRFWNTTNGHQLNSVDTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWKYPSLTKVATLTGHSMRVLYLAMSPDGQTIVTGAGDETLRFWNVFPSVKTPTPVKDTGLWSLGRTQIR 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00068 490 MobiDBLite consensus disorder prediction 151 171 - -
Car06g00068 490 PANTHER PROTEIN FIZZY-RELATED 3 9 490 - -
Car06g00068 490 ProSitePatterns Trp-Asp (WD) repeats signature. 367 381 IPR019775 -
Car06g00068 490 SUPERFAMILY WD40 repeat-like 165 466 IPR036322 GO:0005515
Car06g00068 490 ProSiteProfiles Trp-Asp (WD) repeats profile. 345 389 IPR001680 GO:0005515
Car06g00068 490 Pfam Eukaryotic translation initiation factor eIF2A 329 463 IPR013979 -
Car06g00068 490 ProSitePatterns Trp-Asp (WD) repeats signature. 452 466 IPR019775 -
Car06g00068 490 ProSiteProfiles Trp-Asp (WD) repeats profile. 303 344 IPR001680 GO:0005515
Car06g00068 490 Gene3D - 126 467 IPR015943 GO:0005515
Car06g00068 490 MobiDBLite consensus disorder prediction 26 57 - -
Car06g00068 490 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 433 466 - -
Car06g00068 490 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 303 335 - -
Car06g00068 490 SMART WD40_4 426 465 IPR001680 GO:0005515
Car06g00068 490 SMART WD40_4 211 252 IPR001680 GO:0005515
Car06g00068 490 SMART WD40_4 296 335 IPR001680 GO:0005515
Car06g00068 490 SMART WD40_4 255 292 IPR001680 GO:0005515
Car06g00068 490 SMART WD40_4 383 423 IPR001680 GO:0005515
Car06g00068 490 SMART WD40_4 338 380 IPR001680 GO:0005515
Car06g00068 490 SMART WD40_4 168 209 IPR001680 GO:0005515
Car06g00068 490 ProSiteProfiles Trp-Asp (WD) repeats profile. 433 466 IPR001680 GO:0005515
Car06g00068 490 PANTHER CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED 9 490 IPR033010 GO:0010997|GO:0097027|GO:1904668
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00068 Car-Chr6 883523 887379 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00068 302 466 Miscellaneous Gene Families AT5G08390 21.084 1.29e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00068 K03364 - gmx:547741 839.721