Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00066 ATGGCTCACAGCTCTGACGAGGATACTGATATAAGTGAATCTGAAATAAGTGACTATGAAGATAAATGTTATGAAGAACTGAAAAATGGAAGTCAGAATGTGAAAACCTCGGATGAGAAGTTCACTTGTCCATACTGCCCTAAGAAAAGAAAACGGGATTATTTGTACAATGAACTCCTGCAACATGCTTCTGGGGTGGGTCAGAGTAGTTCACAAAAGAGAAAAGCAAGAGAAAAGGCAACTCATTTGGCTTTAGTGAAATATTTGCAAAAGGATCTTATGAGTGTAGATGCTCCATCGGAACCGGAACCGGCTGATAAAACTGATAATGCTATTGATTCTGATGAGCAGTTTGTGTGGCCTTGGATCGGAATTATAGTTAATATTCCCACTAGTCGAGCAGCAGATGGGCGTTCTGTTGGGGCCAGTGGTTCCAAGCTTAGGGATGAGTACAGACGTAGGGGTTTCAATCCATTTCGAGTAAATCCTCTATGGAACTTCCGAGGTCACTCTGGAACTGCCCTTGTAGAATTCAATAAAAACTGGCCTGGCTTAGATAATGCATTGGCATTTGAAAAAGCATATGTATTAGAACATCATGGGAAAAAGGATTGGTTTGTTGGTTCGGAGCCGAAGTCGGGTCTTTATGCATGGGTTGCTCGAGCAGATGATTACAAAAGGAACAATATCATTGGGGAAAATCTGCGAAAGATGGGTGACATCAAAACCATACCTGAACTTATGGAAGAAGAAGCTCGGAGGCAGGATAAACTTGTGTCCAACTTGACCAACATTATTCAGGTAAAAAACAAGCACTTACATGAGATTGAAGCAAGATGCACCGAGACTACGGCCAAAATGAATGTTGCTATGGAAGAAAAAGATCAGCTCATTCAAGCTTATAATGAAGAGATAAAGAAAATACAGACAAGTGCTAAGGATCACTTCCAAAGGATTTTTAACGATCACGAAAAGCTTAAATCGCAACTGGAATCTCAGAAAAGGGAGCTTGAGTCACGGAAAATTGAATTGGAAAAGCGTGATGCACATAATGAAACTGAAAGAAAAAAGTTGGCAGAAGAGATGGAGGAGAATGCAATGAAaaatagctctcttcagatggcttctctggagcaacaaaaagcagatcaaaatgttatgaaactggctgatgatcaaaagagagaaaaggaaaaactccattctaagatcattcagcttgagagacaactggatatgaaacaaaagctggaattggagattcagcaactaaaaggatcactaagtgtgttgaagcacatagaagatgatgaagatgtagaagttctgaagaaggtcgatgctttgcatatggatttaagggaaaagatACAGTCACTTGAAGATGTAGAGGCACTGTACCAAACATTAATCATTAAGCAGCGTAAGAGTAATGATGAGCTGCAGGATGCTCGAAAAGAATTGATTAATGCCATTAAAGAGATAGCAACTCGTGCCCAAATTggtgtgaagagaatgggagaacttgacactggaccattcctcgaagctatgaagaaaagatataatgaggaggaagctgaagacaaagcttcagaactatgttcattgtgggaagagtatctaaaggacccagattggcatccattcaaagttgtcacgattgaCGGGAAATCGAAAgaatttattaaagatgacgatgaaaagctgaatgggctgagaaaagaagtgggggaaagggcatataatgctgtggtggcagctttaaatgagattaatgaatataatcctagtgggcgatatgtaacctctgaattatggaactataaagagggaaggagagcaactttgcaagaaggagttaagtttttgttgaaccaTTGGAGACGTAAGAAGGGAAAGTTGTGA 1908 0.271 MAHSSDEDTDISESEISDYEDKCYEELKNGSQNVKTSDEKFTCPYCPKKRKRDYLYNELLQHASGVGQSSSQKRKAREKATHLALVKYLQKDLMSVDAPSEPEPADKTDNAIDSDEQFVWPWIGIIVNIPTSRAADGRSVGASGSKLRDEYRRRGFNPFRVNPLWNFRGHSGTALVEFNKNWPGLDNALAFEKAYVLEHHGKKDWFVGSEPKSGLYAWVARADDYKRNNIIGENLRKMGDIKTIPELMEEEARRQDKLVSNLTNIIQVKNKHLHEIEARCTETTAKMNVAMEEKDQLIQAYNEEIKKIQTSAKDHFQRIFNDHEKLKSQLESQKRELESRKIELEKRDAHNETERKKLAEEMEENAMKNSSLQMASLEQQKADQNVMKLADDQKREKEKLHSKIIQLERQLDMKQKLELEIQQLKGSLSVLKHIEDDEDVEVLKKVDALHMDLREKIQSLEDVEALYQTLIIKQRKSNDELQDARKELINAIKEIATRAQIGVKRMGELDTGPFLEAMKKRYNEEEAEDKASELCSLWEEYLKDPDWHPFKVVTIDGKSKEFIKDDDEKLNGLRKEVGERAYNAVVAALNEINEYNPSGRYVTSELWNYKEGRRATLQEGVKFLLNHWRRKKGKL 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00066 635 Coils Coil 443 463 - -
Car06g00066 635 Pfam XH domain 504 633 IPR005379 -
Car06g00066 635 Coils Coil 390 434 - -
Car06g00066 635 Coils Coil 471 498 - -
Car06g00066 635 Coils Coil 291 311 - -
Car06g00066 635 Gene3D XS domain 111 281 IPR038588 -
Car06g00066 635 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 49 634 - -
Car06g00066 635 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 1 49 - -
Car06g00066 635 Coils Coil 316 347 - -
Car06g00066 635 PANTHER RIBONUCLEASE P SUBUNIT P38 49 634 IPR045177 GO:0080188
Car06g00066 635 PANTHER RIBONUCLEASE P SUBUNIT P38 1 49 IPR045177 GO:0080188
Car06g00066 635 CDD RRM_like_XS 118 225 IPR005380 GO:0031047
Car06g00066 635 Pfam XS zinc finger domain 43 86 IPR005381 GO:0031047
Car06g00066 635 Coils Coil 360 380 - -
Car06g00066 635 Pfam XS domain 115 226 IPR005380 GO:0031047
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00066 Car-Chr6 838205 844500 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00066 - - gmx:100812353 993.801