Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00046 ATGTCAGTCTCATGTGGGGTAGAGTGCGTCTTCATCCTCGGCTGCGCTCGTTGGCTATGGAAACGTTGCACATACATCGGCTCCTACGACAGCGCCACGTGGCCATCTGCTACCCCCCTCGAATTCGAACCTGTCCCACGTGTCTGCCGACTCATCCTCGCCATCTACGAACCCGACCTCCACAACCCACACTACTACATACCCTCTCACGGCTACCACATAAATCCCAATTGGGTCGTCAAGCGCGTCACTTACAAAGAAACTGAAGGCCACGCGCCTCCGTATTTAATCTACGTCGACCACGACCACCGCGAAATCGTAATGGCGGTGCGTGGACTGAACTTAGCTAAAGAAAGTGATTATAAGCTTTTGTTGGATAATAAATTGGGGAAACAGATGTTTGATGGTGGTTATGTTCATCATGGGTTGTTGAAATCTGCGGTTTGGTTGTTGAATAAGGAATCTGAGACGTTGAAGAATTTGTGGGTTGAGAATGGTTTGGAGTATGGGATGGTTTTTGCGGGACATTCATTGGGGTCTGGTATTGTTTCTTTGTTGAGTATACTTGTTGTCAATCATAGGGAACGTTTGGGTGGCATTCCTAAAGACAAGATTAGGTGTTATGCTATTGCTCCTGCTAGGTGTATGTCACTTAATTTGGCTGTTAAATATGCTAATCTTATTCATTCCATTGTCTTGCAGGATGATTTCTTGCCAAGAACGCCCACTCCATTGGAAGATATATTCAAATCCGTATTCTGCTTGCCCTGCTTATTATTCTTGGTTTGCCTGAGGGACACCTTCATACCTGAGGGTCGAAAGCTACAAGATCCAAGGAGACTTTATGCCCCCGGACGGATGTACCATATTGTCGAAAGAAAATTTTGCAGATGTGGGAGGTTTCCTCCTGAAGTGAGGACGGCTATTCCTGTTGATGGAAGATTTGAGCATATTGTCTTGTCCTGCAACACAACATCAGATCATGCAATTATTTGGATTGAAAGGGAGGCAGAGAAAGCCTTACAATTAATGAAGAATCAGAACAGCTCCGAAACCGTGACAGTCCCACCAACAGTACAAAAGTTCGAAAGATTAAAGACAATTGAAAAAGAACATAAAGATGCTTTGGAAAGAGCTGTTAGCTTAAATGTACCTCATGCAGTGGACGCCGCAGAGAATGAACCGTCTGAAAACAATGAAGGTGAAGAAGCATCTGGTAATAGTGGGGACAAAGAAGCCACCGCCTCAAGTACTGAATCAAAAACAAGTGGTGGAAGATCAACCTGGGAAGAGGTTGTTGAAAAGCTGTTGAAGAAGAATGAAACAGGAAACAAACACATGGAAGATAGTACAAATGTTTCAGAATGA 1368 0.4437 MSVSCGVECVFILGCARWLWKRCTYIGSYDSATWPSATPLEFEPVPRVCRLILAIYEPDLHNPHYYIPSHGYHINPNWVVKRVTYKETEGHAPPYLIYVDHDHREIVMAVRGLNLAKESDYKLLLDNKLGKQMFDGGYVHHGLLKSAVWLLNKESETLKNLWVENGLEYGMVFAGHSLGSGIVSLLSILVVNHRERLGGIPKDKIRCYAIAPARCMSLNLAVKYANLIHSIVLQDDFLPRTPTPLEDIFKSVFCLPCLLFLVCLRDTFIPEGRKLQDPRRLYAPGRMYHIVERKFCRCGRFPPEVRTAIPVDGRFEHIVLSCNTTSDHAIIWIEREAEKALQLMKNQNSSETVTVPPTVQKFERLKTIEKEHKDALERAVSLNVPHAVDAAENEPSENNEGEEASGNSGDKEATASSTESKTSGGRSTWEEVVEKLLKKNETGNKHMEDSTNVSE 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00046 455 MobiDBLite consensus disorder prediction 409 427 - -
Car06g00046 455 MobiDBLite consensus disorder prediction 389 455 - -
Car06g00046 455 Pfam Lipase 3 N-terminal region 7 65 IPR005592 GO:0016042
Car06g00046 455 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 451 - -
Car06g00046 455 Gene3D alpha/beta hydrolase 41 259 IPR029058 -
Car06g00046 455 Pfam Lipase (class 3) 107 243 IPR002921 GO:0006629
Car06g00046 455 CDD Lipase_3 41 243 - -
Car06g00046 455 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 451 - -
Car06g00046 455 MobiDBLite consensus disorder prediction 431 448 - -
Car06g00046 455 SUPERFAMILY alpha/beta-Hydrolases 42 244 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00046 Car-Chr6 600967 604207 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00046 1 346 Miscellaneous Gene Families AT5G37710 75.216 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00046 - - gmx:100798831 714.146