Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00042 ATGGAGGACGACAACGCAGACCAAGAGAAGCTGTTAACGCAACAAATCGCTGTCATTCTCGACGAAGTTCGAACCTCATACGCCACACACAACCGAAAGCTCAAGGAACTCTCCCTCCTTCGATCCAAATCCCCTTCTCCGTCACACTTCTTCACTGCATTCTCCAAAGCCCTAATTCCTCTCTTCAACTTCCACAAGCGCCTCGCCTCCGCTGACCGCATCGTTTCCTTCGTATCTTCCTTCACCTCCGTCCGTCACCCTACCGATGCCGCCGTTTGTGACGAGTTTCTCGACCATTTCCTTCATTTCCTCCTTGTCGCCGCGGCTGCATCCGATAAGACCGTTAGATTTAGAGCCTGCCAGATCGTCTCCGAGATAATATTGCGGTTACCAGATGATGCAGAAGTGAGCAATGATTTATGGGATGAGGTGATAGAATGTATGATGGTTAGGGTACGGGACAAGATCGCTGTGGTGCGTACTTTTGCGGTTCGGGCGCTTTCTCGCTTTGGGAATGATTCTGCTAACAGTGATATCCTTGATTTATTCCTTGAGATGCTTCCATTGGAACAGAATGTGGACGTTCGTAAGATGATTGTGTTGTCTTTGCCTCCTTCCAGTGCAACTTCTCAAGTTATCATTGATTGTACTTTGGATGTGAGTGAATCTGTTCGCAAAGCAGCATACTGTGTTCTAGCAAATAAGTTTCCTCTTCAAAGCTTAAGCATTAAGCTCAGGACAGTAATTCTTCAGAGAGGACTTGCTGATCGATCTGTCGCGGTCTCAAAGGAATGTTTCAAACTATTGAAAGATGAATGGCTTATGAAGTGCTGTAATGGTGATCCTTTAGAGCTTTTGAAGTATCTCGATGTTGAAACCTATGAAACAGTGAGCGAGTCTGTTATGGAGGCACTTCTAAAAGCTGGTTTAGTGAAACTAAATAATGGTGCAAGTATCCAGCAGCATATAACATCAAACAGGGAGACAAAAGAAGGGGACTCGGTTCATTGTCCACCAAGCATTGTGTTGATGGAGGCAGAGTCTGCTCTTTATTGGAGAACTGTTTGCGAACATTTGAAGTCAGAAGCACAAGCCATAGGCTCGGATGCTGCAGCCACAACGGGCACCGAAGCAGAAGTATATGCGGCAGAAGCCTCAAATAAAAATGACCTTCTAGAAAAAATTCTTCCTGCTACAGTAGATGAATACATAGATTTGGTTAGAGCTCATATCAATGCTGGATCAAACCATCGCTTTGCTTGCCGGCAGCTGCTTTTGCTTGGTGCTATGTTTGATTTTTCTGACACTTCAAATAGAAAGGTGGCTGGTGCATTTCTGCAGGAGCTGATGAGCAAGCCTCCCGAACATGAGGTTGATAATGAAGGGATTGTTGTTGTCATTGGAGATGGCTTAAGTTTTGGTGGTGACACTGATTGGGCTGAAGCCATAGCCAGATTGGCAAGGAAAGTCCATGCTTCTCCTGGGGAATTTGAAGAAGTTGTTCTTGCAATCATAGAAAGGCTAGCTCGACCTTCAGATTATGTGCAGTGGATACACACCCTTTCTCTTACTGGCCTTCTATTGAAAAATGCAGTGTCAATGCGCTTTCTTCAGGGCAAAGCGATAGAACCAGAAGAACTACTCCAATCTTTACTACTTCCTGGGGCGAAACAATCTCACTTGGACGTGCAAAGAATTGCTGTCAGATGCCTTGGTCTCTTTGGCCTTTTGGAGAGGAGACCAAATGCTGAACTTTTGAAACAGCTGAGGATTTCATACATTAAGGGGCCACATTTAATTAGTATAGAGGCATGTAAAGCATTAATTGATCTTTTGATGTGGCATGGTCCTCAAGAAGTTGACAGGGTTTTAAATCCCGATATTCCTATCCAAGTAAACGGTGACAAGAAGTGTTTTTGTCCCGTGAACTTCACTGATTCCGAAGGGGATTCAAATTCAAACGTTGGCATGCTTGATCATTTATACGGTGGCTTTGAAAATGATGACTGGGCTGATCCTCCTTTAACTAGCAATGAAGACGAATGCATTTTTGCCATACTTGGGGAGGGGTTTGCGAAAATTCTTCTTCTAAGTGACAACTATCCAAGCATACCGGCTTCTTTGCACCCTGTGCTTTTATCTAAGCTCATTTACTTGTACTTCAGCGACGTCTCCGAAAATCTGTACAGGTTGAAGCAATGCTTATCTGTTTTCTTTGAGAACTACCCGTGTCTCTCAACAAATCACAAGGCAAGCATTAATGATAGATGTGTTTCAAAGGCTTTCATTCCAGTTATGCGTTCAATGTGGCCAGGAATTTTTGGCAATTCTGGGGGTTCTACTTTTATGGTGTCTCAGATGCGGAAGCGTGCTGTTCAAGCTTCCCGTTTTATGTTGCAGATGGTGCAGATTCCATTATTCGTTAAAGAGACGGAAGCAGAGTGTGAAAACTCCAGTACAGAACACCCACAAGTTATTGATGGCTGTGCTGAAGTTCCATTTGAGTGTGGCGAGGAGGGTCTTGCACTACGCATAGCCATAGAGGTCGCAAGCTTTCACTCGAAGAAGACAGCTGCTGAGAAGGCATATGTATCGGCACTATGTAGAATGCTTGTCTCGCTTCATTTTCGGTTATCAGAACAAGGGCCGATAAAAATTATGAGGAAACTCTTATGTCGTATGGTTGAATGTGTATCTTCAGAGAAGGATCTTGTTAAAGAATTGAGACGCATGGCTGAGCATCTAATGACAGTTGATAGGCAACCAGATCAGGCATTTTTGCAAGATGAAGTTAATCTCATTTTGGGGAAACTGGAACTCGACTTCAACCTGGATTTGGATGCTTCTGTTGCAATGCCACAAACGCCGGCCGTACAGCCAACTAGAGCTGCACGTTCGAGGAGAAGGGTAAGGATTGAACAAGATAGTTCCGATGAAGAAGATTCACCTGCTTCTGTTGTACCTACCACTCTTCGTACAGTACAACGTCGCTCACAGAGAGCAAGCAAAACTGCAGCCATGAACAAGATGTCTGCCAGGAGATCACCCGAAATTGATGAAATTGAAGAGCAGGAGGAAGAAGAGTCGAATTTGACATCTGACAATTCTGAAGAATCCGACTAG 3123 0.4435 MEDDNADQEKLLTQQIAVILDEVRTSYATHNRKLKELSLLRSKSPSPSHFFTAFSKALIPLFNFHKRLASADRIVSFVSSFTSVRHPTDAAVCDEFLDHFLHFLLVAAAASDKTVRFRACQIVSEIILRLPDDAEVSNDLWDEVIECMMVRVRDKIAVVRTFAVRALSRFGNDSANSDILDLFLEMLPLEQNVDVRKMIVLSLPPSSATSQVIIDCTLDVSESVRKAAYCVLANKFPLQSLSIKLRTVILQRGLADRSVAVSKECFKLLKDEWLMKCCNGDPLELLKYLDVETYETVSESVMEALLKAGLVKLNNGASIQQHITSNRETKEGDSVHCPPSIVLMEAESALYWRTVCEHLKSEAQAIGSDAAATTGTEAEVYAAEASNKNDLLEKILPATVDEYIDLVRAHINAGSNHRFACRQLLLLGAMFDFSDTSNRKVAGAFLQELMSKPPEHEVDNEGIVVVIGDGLSFGGDTDWAEAIARLARKVHASPGEFEEVVLAIIERLARPSDYVQWIHTLSLTGLLLKNAVSMRFLQGKAIEPEELLQSLLLPGAKQSHLDVQRIAVRCLGLFGLLERRPNAELLKQLRISYIKGPHLISIEACKALIDLLMWHGPQEVDRVLNPDIPIQVNGDKKCFCPVNFTDSEGDSNSNVGMLDHLYGGFENDDWADPPLTSNEDECIFAILGEGFAKILLLSDNYPSIPASLHPVLLSKLIYLYFSDVSENLYRLKQCLSVFFENYPCLSTNHKASINDRCVSKAFIPVMRSMWPGIFGNSGGSTFMVSQMRKRAVQASRFMLQMVQIPLFVKETEAECENSSTEHPQVIDGCAEVPFECGEEGLALRIAIEVASFHSKKTAAEKAYVSALCRMLVSLHFRLSEQGPIKIMRKLLCRMVECVSSEKDLVKELRRMAEHLMTVDRQPDQAFLQDEVNLILGKLELDFNLDLDASVAMPQTPAVQPTRAARSRRRVRIEQDSSDEEDSPASVVPTTLRTVQRRSQRASKTAAMNKMSARRSPEIDEIEEQEEEESNLTSDNSEESD 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00042 1040 PANTHER CONDENSIN COMPLEX SUBUNIT 3 8 1029 - -
Car06g00042 1040 MobiDBLite consensus disorder prediction 1020 1040 - -
Car06g00042 1040 MobiDBLite consensus disorder prediction 955 1040 - -
Car06g00042 1040 Pfam Nuclear condensing complex subunits, C-term domain 520 876 IPR025977 -
Car06g00042 1040 MobiDBLite consensus disorder prediction 981 1009 - -
Car06g00042 1040 Gene3D - 58 242 IPR011989 -
Car06g00042 1040 SUPERFAMILY ARM repeat 95 578 IPR016024 -
Car06g00042 1040 PANTHER CONDENSIN COMPLEX SUBUNIT 3-RELATED 8 1029 IPR027165 GO:0000796|GO:0007076
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00042 K06678 - gmx:100817677 1565.44