Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00038 ATGCTATACAAATCTCAACTAATTTCAACTTCAAATCACAACAACACACAAATCAAAACACCTTCTTATAACTACAAATTCTCTTTCAAATATTCAATGGCTCTCATCGTTAATCTTCCTATTGGAACTCCACCTCAACTTCAACAAATGGTGTTGGACACAGGAAGCCAACTCTCGTGGATTCAGTGTCACAAAAAAGCACCTCCAACGGCGTCGTTTGATCCTTCTCTCTCTTCAACTTTCTCTATCCTCCCTTGTACTCACCCTCTTTGTAAACCACGAATTCCCGATTTTACCCTCCCAACTTCCTGTGACCAGAACCGCCTCTGCCACTATTCATATTTTTACGCAGACGGCACTTACGCTGAGGGTAATCTCGTCAGAGAAAAATTCACATTTTCTCGTTCCGTTTCTACCCCTCCTCTAATCCTCGGCTGCGCCACAGAATCAACTGACCCCCGGGGTATTTTAGGAATGAATCTCGGCCGTTTGTCCTTTGCTCACCAGTCCAAAATTACCAAATTCTCCTACTGTGTACCAACCCGTCAAACCCGACCCGGAATCTCTCCAACCGGGTCATTCTACCTCGGTAACAACCCGAATTCTAAAGGGTTTCGTTACGTCGGAATGTTGACATTTTCCAAGAGTCAACGCATGCCGAACCTCGACCCCTTGGCTTACACTATCCCTATGCAAGGTATAAGAATCGGCGGGAAGAAACTGAGCATTTCGCCGGCGGTTTTCCGAGCCGATGCAGGTGGGTCGGGTCAAACCATGGTTGACTCCGGATCCGAATTCACATATTTAGTTAGCGATGCTTATGATAAAGTGCGGGCAGAAGTGGTTAGAGCTGTGGGGTCGAGGATTAAAAAGGGTTACGTGTACGGCGGGGTAGCTGACATGTGTTTCGATGGTAATGCGGTTGAGATCGGACGGCTGATAGGTGAGATGGTGTTTGAATTTGAAAGAGGCGTGGAGGTTGTGATTCCGAAGGAGAGAGTACTTGCTGACGTAGGGGGTGGGGTCCACTGTGTTGGGATTGGAAGCTCCGATAAATTAGGTGCGGCTAGTAACATTATTGGGAATTTTCATCAGCAAAATATGTGGGTAGAATTTGATCTGCTTCATCGTAGAATTGGCTTTGGTAGAGCTGATTGTAGCAGATTGGCGAAGTAA 1176 0.4626 MLYKSQLISTSNHNNTQIKTPSYNYKFSFKYSMALIVNLPIGTPPQLQQMVLDTGSQLSWIQCHKKAPPTASFDPSLSSTFSILPCTHPLCKPRIPDFTLPTSCDQNRLCHYSYFYADGTYAEGNLVREKFTFSRSVSTPPLILGCATESTDPRGILGMNLGRLSFAHQSKITKFSYCVPTRQTRPGISPTGSFYLGNNPNSKGFRYVGMLTFSKSQRMPNLDPLAYTIPMQGIRIGGKKLSISPAVFRADAGGSGQTMVDSGSEFTYLVSDAYDKVRAEVVRAVGSRIKKGYVYGGVADMCFDGNAVEIGRLIGEMVFEFERGVEVVIPKERVLADVGGGVHCVGIGSSDKLGAASNIIGNFHQQNMWVEFDLLHRRIGFGRADCSRLAK 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00038 391 PANTHER ASPARTYL PROTEASE-RELATED 1 391 IPR001461 GO:0004190|GO:0006508
Car06g00038 391 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 1 391 - -
Car06g00038 391 SUPERFAMILY Acid proteases 36 389 IPR021109 -
Car06g00038 391 ProSiteProfiles Peptidase family A1 domain profile. 35 382 IPR033121 -
Car06g00038 391 Pfam Xylanase inhibitor C-terminal 226 382 IPR032799 -
Car06g00038 391 Gene3D Acid Proteases 196 391 IPR021109 -
Car06g00038 391 Gene3D Acid Proteases 8 195 IPR021109 -
Car06g00038 391 CDD pepsin_A_like_plant 36 386 IPR034161 -
Car06g00038 391 Pfam Xylanase inhibitor N-terminal 36 184 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00038 Car-Chr6 465452 467225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00038 37 391 Miscellaneous Gene Families AT1G44130 23.174 2.04e-19 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00038 - - gmx:100803089 694.501