Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00024 ATGGAGAGAGTAAACACTAAATCTTCTTTGAAGACAAAAGATGTACTCAAAGAAAGGTTTGATGACAAGACTAAGGCTTCAAGAAAATCTCCTCCCAAAGAAAAAACTAAACCACAGGAATTCAAACTTCACACTCAAGAAAGAGCTGTCAAACGTGCAATGTTCAACTATGAAGTGACTACAAAATTGTATCTCATGGAGTTGCAAAAGAGACAAGAAGAGAAGTTAATTAAGATGATTGAAGAGGAAGAGATACGTTTGCTAAGGAAAGAAATGGTTCCAAGAGCTCAATTGATGCCTTATTTTGATAAGCCATTCTCCCCACAAAGAACAAACAGAACAGTTCCAAGAGAATCATGCCTCCACATGATGAGTAGCAAGTGTTGGAGTTGCACATCTGGTAATGCATTCTATAACATGCACCAATGTGGTCATCAAGCTCTCAATCCAATTAAATAG 459 0.3725 MERVNTKSSLKTKDVLKERFDDKTKASRKSPPKEKTKPQEFKLHTQERAVKRAMFNYEVTTKLYLMELQKRQEEKLIKMIEEEEIRLLRKEMVPRAQLMPYFDKPFSPQRTNRTVPRESCLHMMSSKCWSCTSGNAFYNMHQCGHQALNPIK 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00024 152 Coils Coil 66 86 - -
Car06g00024 152 MobiDBLite consensus disorder prediction 1 40 - -
Car06g00024 152 Pfam Targeting protein for Xklp2 (TPX2) domain 41 112 IPR027329 -
Car06g00024 152 PANTHER TARGETING PROTEIN FOR XKLP2 7 145 IPR009675 GO:0005819|GO:0005874|GO:0032147|GO:0060236
Car06g00024 152 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY 7 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00024 Car-Chr6 286626 289883 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00024 - - mtr:MTR_3g064800 254.218