Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00023 ATGAAGCTCGACGTTGATGTCTTAAGATATCTCTCTAAAGATGATTTTAGGGTTCTCACTGCCGTTGAATTAGGCATGAGAAACCATGAACTTGTTCCTACTGAACTTATTGACCGAATCGCTCGTCTCAAGCATGGAGGCACTTACAAGGTTTTGAAAAACTTGCTCAAACATAAGTTGTTGCACCACGACTCTTCTAAATATGATGGATTTCGCCTTACCTACCTTGGTTATGATTTTCTTGCCATCAAAACTATGGTGAACAAAGGAGTGTTTGTGGCGGTTGGTCGCCAGATTGGTGTTGGAAAGGAATCTGATATATTTGAGGTTGCTCGTGAAGATGGAACCGTTTTAGCTATGAAGTTACATAGGCTTGGTAGAGTCTCTTTTAGAGCTGTCAAATCTAAGCGTGACTACTTAAGACATCGTAGCAGTTATAATTGGCTCTATTTGTCTCGCCTTGCGGCACTTAAAGAATTTGCTTTCATGAAGGCTTTGGAAACTCATGGCTTTCCTGTTCCAAATGCTGTGGAACATAATCGGCATTGTGTAATCATGTCACTTGTCCAAGGTTATCCTCTCGTTCAGGTAAAGCAGTTACAAAATCCAGAGACAGTTTTTGAGACAATTATTGGTATAGTTATTCGGCTAGCAGAGCATGGTCTCATTCATTGCGATTTCAATGAATTTAACATCATGATTGACGATGATGAAAAAATTACCATGATTGATTTTCCACAAATGGTGTCTGTGTCGCACCGCAATGCAAAGATGTACTTTGATCGTGATGTTGAATGTATCTTTAAGTTTTTCAGAAAGAGGTTCAATATTTCTTTTCAAGAAAGCATAGATGATGTTGATGAATCTGATGAAGGGAGAGACGAAGCTGGAAAACTTTGTTTTTCCACAATAGACCGAAGTGCCGGTTTTCTAGATAAGGAACTTGCTGCTAGTGGCTTTTCTAGTAAGGACGAGGAAGATATTCAGAAGTTCATTGAAGGCGGGGTGGAGAGTGATACAAATTCTGATAGTGAAGATGATGACTTGGTGACAAATCTGAATGAAGCAGACGATTTAAATGTTGATTCTTTACATTTGTCGGAGCAGGATGATGGACATGAAAGTCATGGAATAGAGGAGAGCGGTGAAGCTGTTGAAAGCAGTGGATCTGAAAAGGAAGAGGCAACTGACCAGGAGGAAGACAATGAAATTGAAGCTGAACTCACAAAGAGCTTGGCAAAGCAAAGACAACGTGCTATAGCATCAGCTCGTAGGGGACGGAAAACAATTGCATCCAGGAATTCCTACAAAGACAAGGGTGGTAGGTCATCTCACAGTTCAAAGGTTCAAAAGCAAATGAGCAGCTGGTGA 1371 0.4055 MKLDVDVLRYLSKDDFRVLTAVELGMRNHELVPTELIDRIARLKHGGTYKVLKNLLKHKLLHHDSSKYDGFRLTYLGYDFLAIKTMVNKGVFVAVGRQIGVGKESDIFEVAREDGTVLAMKLHRLGRVSFRAVKSKRDYLRHRSSYNWLYLSRLAALKEFAFMKALETHGFPVPNAVEHNRHCVIMSLVQGYPLVQVKQLQNPETVFETIIGIVIRLAEHGLIHCDFNEFNIMIDDDEKITMIDFPQMVSVSHRNAKMYFDRDVECIFKFFRKRFNISFQESIDDVDESDEGRDEAGKLCFSTIDRSAGFLDKELAASGFSSKDEEDIQKFIEGGVESDTNSDSEDDDLVTNLNEADDLNVDSLHLSEQDDGHESHGIEESGEAVESSGSEKEEATDQEEDNEIEAELTKSLAKQRQRAIASARRGRKTIASRNSYKDKGGRSSHSSKVQKQMSSW 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00023 456 PANTHER SER/THR-PROTEIN KINASE RIO2 1 456 - -
Car06g00023 456 CDD RIO2_C 94 274 IPR030484 GO:0004672
Car06g00023 456 MobiDBLite consensus disorder prediction 431 445 - -
Car06g00023 456 SMART rio_2 64 288 IPR000687 GO:0004674|GO:0005524
Car06g00023 456 Pfam Rio2, N-terminal 8 89 IPR015285 GO:0004674|GO:0005524|GO:0006468
Car06g00023 456 Gene3D Transferase(Phosphotransferase) domain 1 192 339 - -
Car06g00023 456 SUPERFAMILY Protein kinase-like (PK-like) 95 271 IPR011009 -
Car06g00023 456 MobiDBLite consensus disorder prediction 367 456 - -
Car06g00023 456 MobiDBLite consensus disorder prediction 367 392 - -
Car06g00023 456 Gene3D Phosphorylase Kinase; domain 1 93 190 - -
Car06g00023 456 PANTHER BNAA01G19540D PROTEIN 1 456 - -
Car06g00023 456 Pfam RIO1 family 106 279 - -
Car06g00023 456 Gene3D - 1 90 IPR036388 -
Car06g00023 456 SUPERFAMILY "Winged helix" DNA-binding domain 5 90 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00023 Car-Chr6 276171 282461 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00023 K07179 - gmx:100789490 753.051