Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03471 ATGAGCGGAGCTGTTATTGTTGCTGTTGCTGCTGCTATCGGTAACTTACTGCAAGGATGGGATAATGCCACTATTGCAGGATCTATTCTATACATAAAGAAGGAATTTCAATTAGAAAATGAACCCACAGTTGAAGGTCTAATTGTGGCTATGTCACTTATCGGAGCCACCGTTGTTACTACATGCTCCGGAGCCCTATCAGACTTGCTAGGACGACGTCCCATGTTGATTATATCCTCTGTCCTTTATTTTGTTAGTTCTCTTGTCATGTTTTGGTCTCCAAATGTTTATATCCTTCTCTTTGCAAGACTTTTAGATGGTCTTGGAATTGGTTTGGCAGTTACCTTGGTACCTCTTTACATATCTGAGATTGCTCCTCCTGAGATTAGGGGATTACTCAATACACTTCCACAGTTCACTGGTTCTGCTGGTATGTTTTTCTCCTACTGTATGGTCTTTGGGATGTCACTAACCAAGTCCCCCAGCTGGAGACTCATGTTGGGTGTTCTTTCCATCCCCTCTCTTATTTATTTTGCACTCACAATATTGTTATTGCCTGAGTCTCCAAGATGGCTTGTCAGTAAAGGCCGAATGCTTGAGGCTAAGAAGGTTTTGCAGCGCCTTCGTGGATGCGAAGATGTCGCTGGTGAGATGGCTTTACTGGTTGAGGGTCTTGGGGTTGGGGGTAATACATCCATAGAAGAGTACATAATTGGTCCGGCCAATGAATTTAATGATGAAGAGGATCCATCTACGGGTAAAGATCAGATCAAGTTGTATGGCTCCGAACATGGTCAGTCCTGGGTTGCCAGACCTGTCACTGGACAGAGTTCCATTGGTCTTATGTCTCGGAAAGGAAGCATGGCAAATCAGAGTGGTCTTGTGGATCCTATGGTGACCCTCTTCGGTAGTGTCCATGAGAAGCTCCCGGAAACAGGAAGCATGCGAAGCACTCTTTTTCCACACTTTGGAAGCATGTTCAGTGTCGGGGGAAATCAGCCTAGGAATGAAGATTGGGATGAAGAAAGCCTTGCTAGAGAGGGTGATGACTATGTCTCTGATGCTGCGGCCGGTGATTCTGATGACAATTTGCACAGTCCATTGATCTCACGTCAAACAACTAGTCTGGATAAGGAAATGCCTCATCCTGCCCAGGGTAGCCTTTCAAGCATGAAGCAAGGTAGTCTTTTACAAGGGAATGCAGGAGAACCTGTTGGGAGTACTGGGATTGGTGGTGGTTGGCAGTTAGCTTGGAAATGGTCTGAACAAGAAGGCCCAGATGGAAAGAAGGAAGGTGGTTTCAAGAGAATATATTTACACCAAGAGGGTGGTGGTCCTGGATCTAGACGCGGGTCTGTGGTTTCACTTCCTGGTGGTGATGTGCCAACAGATGGCGAGGTCGTACAGGCTGCTGCTCTTGTGAGTCAACCAGCTCTTTATACCAAGGAGCTCTTGCATCATCAGCCAGTGGGACCCGCTATGATTCATCCATCTGAAACAGCAGAAAAAGGGCCAAGTTGGAATGATCTTTTTGAACCGGGTGTGAAGCATGCGTTATTTGTGGGAGTAGGACTTCAAATTCTTCAGCAGTTCTCTGGTATAAATGGTGTCCTCTACTATACACCACAAATTCTTGAGCAGGCAGGTGTTGGTTATCTTCTTTCAAACCTGGGCCTTGGTTCTACTTCATCGTCTTTTCTAATTAGTGCGGTGACAACCTTGTTGATGCTTCCTTGTATAGCTGTTGCCATGAGGCTCATGGATATTTCTGGCAGAAGGACTTTGCTGCTCACTACAATCCCTGTCTTGATAGTATCTCTTCTCATATTAGTCCTAGGGAGTTTTGTGGATTTGGGCAGCACTGCAAATGCATCAATCTCAACCATTAGTGTTGTTATCTATTTCTGTTTCTTTGTCATGGGATTTGGGCCAATTCCGAATATACTTTGTGCTGAGATCTTCCCGACTCGAGTTCGTGGTCTTTGCATTGCCATATGTGCTCTTACCTTTTGGATATGTGACATCATTGTTACCTATTCACTCCCAGTTATGCTAAATTCTATGGGCCTTGGTGGTGTTTTTGGTTTGTATGCAGTCGTCTGCTTCATAGCTTGGGTGTTTGTCTACTTGAAAGTTCCAGAAACCAAAGGCATGCCACTGGAAGTGATCATCGAGTTCTTCTCCGTCGGAGCAAAACAAGCTGAGACTGCCAAGCATAACTGA 2223 0.4525 MSGAVIVAVAAAIGNLLQGWDNATIAGSILYIKKEFQLENEPTVEGLIVAMSLIGATVVTTCSGALSDLLGRRPMLIISSVLYFVSSLVMFWSPNVYILLFARLLDGLGIGLAVTLVPLYISEIAPPEIRGLLNTLPQFTGSAGMFFSYCMVFGMSLTKSPSWRLMLGVLSIPSLIYFALTILLLPESPRWLVSKGRMLEAKKVLQRLRGCEDVAGEMALLVEGLGVGGNTSIEEYIIGPANEFNDEEDPSTGKDQIKLYGSEHGQSWVARPVTGQSSIGLMSRKGSMANQSGLVDPMVTLFGSVHEKLPETGSMRSTLFPHFGSMFSVGGNQPRNEDWDEESLAREGDDYVSDAAAGDSDDNLHSPLISRQTTSLDKEMPHPAQGSLSSMKQGSLLQGNAGEPVGSTGIGGGWQLAWKWSEQEGPDGKKEGGFKRIYLHQEGGGPGSRRGSVVSLPGGDVPTDGEVVQAAALVSQPALYTKELLHHQPVGPAMIHPSETAEKGPSWNDLFEPGVKHALFVGVGLQILQQFSGINGVLYYTPQILEQAGVGYLLSNLGLGSTSSSFLISAVTTLLMLPCIAVAMRLMDISGRRTLLLTTIPVLIVSLLILVLGSFVDLGSTANASISTISVVIYFCFFVMGFGPIPNILCAEIFPTRVRGLCIAICALTFWICDIIVTYSLPVMLNSMGLGGVFGLYAVVCFIAWVFVYLKVPETKGMPLEVIIEFFSVGAKQAETAKHN 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03471 740 Pfam Sugar (and other) transporter 501 724 IPR005828 GO:0016021|GO:0022857|GO:0055085
Car05g03471 740 Pfam Sugar (and other) transporter 7 223 IPR005828 GO:0016021|GO:0022857|GO:0055085
Car05g03471 740 CDD MFS_GLUT_like 517 714 - -
Car05g03471 740 MobiDBLite consensus disorder prediction 373 403 - -
Car05g03471 740 ProSitePatterns Sugar transport proteins signature 1. 63 80 IPR005829 GO:0016021|GO:0022857|GO:0055085
Car05g03471 740 PRINTS Sugar transporter signature 15 25 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car05g03471 740 PRINTS Sugar transporter signature 100 119 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car05g03471 740 PRINTS Sugar transporter signature 529 539 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car05g03471 740 PRINTS Sugar transporter signature 628 649 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car05g03471 740 PRINTS Sugar transporter signature 651 663 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car05g03471 740 PANTHER - 1 735 - -
Car05g03471 740 Gene3D MFS general substrate transporter like domains 3 257 IPR036259 -
Car05g03471 740 MobiDBLite consensus disorder prediction 373 402 - -
Car05g03471 740 PANTHER TONOPLAST MONOSACCHARIDE TRANSPORTER 2 1 735 - -
Car05g03471 740 Gene3D MFS general substrate transporter like domains 499 738 IPR036259 -
Car05g03471 740 SUPERFAMILY MFS general substrate transporter 6 721 IPR036259 -
Car05g03471 740 ProSitePatterns Sugar transport proteins signature 2. 105 130 IPR005829 GO:0016021|GO:0022857|GO:0055085
Car05g03471 740 ProSiteProfiles Major facilitator superfamily (MFS) profile. 7 716 IPR020846 GO:0022857
Car05g03471 740 CDD MFS_GLUT_like 14 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03471 Car-Chr5 79208222 79214803 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03471 1 740 Organic Solute Cotransporters AT4G35300 73.450 0.0 1056
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03471 - - mtr:MTR_3g118530 1307.35