Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03462 ATGGAAGGGTTGGCGGTTCCATTCCCAAATCTCTTGCTTCCAAAAGTTGCCGCCGATGcttctacttgtacttccatttccatttccacttccacttccactctcactcccactGGATTTCTCTCTCTCAAACAACTTGGCCGACGTCGTCGTTTTGCCTTTTGTACATCatcgcagtcgcaaccgcaatcgcaacctcaaCACCCAGCCGAACAAGTGATCACAACAGGGAATGTGAGTGGAGATTCCATACGGCAAAGATTTCTTAGTTTTTATGCTTCCCGCGGTCACAAGGTCCTTCCCAGTGCTTCTCTCGTCCCAGATGACCCCACTGTTCTCCTCACTATCGCTGGTATGCTTCAATTCAAGCCTATCTTCCTTGGTAATGTTCCCAGAGAATTGCCTCGTGCTACTACTTCTCAAAGGTGCATACGTACTAATGATATCAACAACGTTGGCCAAACCTCACGACATCATACCTTCTTTGAAATGCTTGGAAACTTCAGCTTTGGTGATTACTTCAAAAAACAAGCTATTCAATGGGCCTGGGAATTATCTACCATTGAgtttgctttGCCGCCAGAGAGATTATGGATTAGTGTTTATAAAGATGATCATGAGGCTTTTCAGTTATGGTCTCAACAGATTGGTGTCCCTGCTGAGCGAATTAAGAGCTTGGGTGAAGATGACAACTTTTGGACTAGTGGAGCCACCGGTCCCTGTGGTCCTTGCTCCGAAATATATTATGACTTTCATCCTGAGAGGGGATACACTGATGCCGATCTTGGTGATGATACACGGTTTATAGAGTTCTACAATTTAGTATTCATGCAATACAACAAAAAAGATGATGGTTCTCTTGAACCTCTAAAGCAAAAGAACATAGATACTGGGCTTGGTTTGGAGCGCATGGCTCGCATTCTTCAAAAGGTTCCCAACAACTATGAAACGGACTTGATTCTCCCCATCATAGAGAAGGCATCTGAATTAGCAAATGTTTCATATGGCATTTCTGATGATTTGACAAAGAGGTATCTAAAAATTGTAGGAGATCACATGCGTGCAATTGTGTTTCTCGTCTCTGATGGTGTTGTCCCATCAAATGTTGGGAGGGGTTATGTAGTTCGACGGCTTATTAGAAGGGTCGTTCGTACAGGCAGATTGCTTGGTATAAAAGGTGATGGTAGGGGAGACCTTGATGGAGCATTTTTACCCATTATTGCTGAGAAAGTAGTAGAATTAAGTACACACATTGATGCTGATGTGAAGAATAGAGCTCCCCGAATCCTTGAGGAGTTGAAGAGAGAAGAGCTTCGGTTTGTGCAGACACTGGAAAGAGGAGAAAAGTTGCTCGAGGAGAAGCTTGCTGATGCTATATCAAGAGCTGAAAGAAATGGAACTGTGCCTTGCTTGGCTGGTGAAGATGTGTTTATTTTGTATGATACCTACGGTTTCCCAATGGAAATAACAAAAGAAGTGGGGGAAGAACGTGGTGTTAGTATTGACATGAATGGTTTTGATATTGAGATGGAGAAGCAAAGGCGACAATCACAAGCTGCACACAATACCGTCAAGCTTGCCATTGGAAGTGGGGCAAATATTGTAGACAATGTTCCTGACACTGAGTTTGTTGGATATGACAGTCTTTATTGTAATGCAATTGTAGCAAGCCTAGTGGTAAATGGTGATCCAGCTGTACAGGTTAGTGAAGGTAGTAATGTGGAAGTTTTGCTGAACAAGACTCCATTTTATGCTGAATCAGGAGGACAAATTGGAGATCATGGTTTTCTATATATTTCAGAAGGCAAGAATCAACCTCGGGCTGTTGTGGAGATAATAGATGTTCAGAAGTCTTTTGGTAATATATTTGTTCACAAGGGTACTGTCCAAAAGGGTGTTGTAGATGTTGGTATACAAGTGGAAGCAACAGTGAATGTAAAGTTGAGGCAACGAGCTAAGGTTCATCATACTGCTACTCATTTACTACAAGCTGCACTTAAAGAAGTCATCGGTCAGGAGACCTCTCAAGCTGGTTCTTTGGTTGCATTTGATCGTCTCAGATTTGATTTCAACTTCCACCGCCCACTTCTTGATAATGAGCTTGCAAAAATTGAAATGCTGATCAACGGATGGATTGAGGATGCAATTCTTCTTCAGACCAAAGTGATGCCTCTTTCTGACGCAAAAAAAGCAGGGGCTATTGCAATGTTTGGAGAAAAATATGGTGAAGAGAGCAGGGTATTGCATCTGGAGTCAGGCGAATTGAAGCTGTAG 2274 0.4081 MEGLAVPFPNLLLPKVAADASTCTSISISTSTSTLTPTGFLSLKQLGRRRRFAFCTSSQSQPQSQPQHPAEQVITTGNVSGDSIRQRFLSFYASRGHKVLPSASLVPDDPTVLLTIAGMLQFKPIFLGNVPRELPRATTSQRCIRTNDINNVGQTSRHHTFFEMLGNFSFGDYFKKQAIQWAWELSTIEFALPPERLWISVYKDDHEAFQLWSQQIGVPAERIKSLGEDDNFWTSGATGPCGPCSEIYYDFHPERGYTDADLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERMARILQKVPNNYETDLILPIIEKASELANVSYGISDDLTKRYLKIVGDHMRAIVFLVSDGVVPSNVGRGYVVRRLIRRVVRTGRLLGIKGDGRGDLDGAFLPIIAEKVVELSTHIDADVKNRAPRILEELKREELRFVQTLERGEKLLEEKLADAISRAERNGTVPCLAGEDVFILYDTYGFPMEITKEVGEERGVSIDMNGFDIEMEKQRRQSQAAHNTVKLAIGSGANIVDNVPDTEFVGYDSLYCNAIVASLVVNGDPAVQVSEGSNVEVLLNKTPFYAESGGQIGDHGFLYISEGKNQPRAVVEIIDVQKSFGNIFVHKGTVQKGVVDVGIQVEATVNVKLRQRAKVHHTATHLLQAALKEVIGQETSQAGSLVAFDRLRFDFNFHRPLLDNELAKIEMLINGWIEDAILLQTKVMPLSDAKKAGAIAMFGEKYGEESRVLHLESGELKL 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03462 757 ProSiteProfiles Alanyl-transfer RNA synthetases family profile. 79 757 IPR018165 GO:0003676|GO:0004813|GO:0005524|GO:0006419
Car05g03462 757 CDD AlaRS_core 82 311 - -
Car05g03462 757 SUPERFAMILY Translation proteins 539 644 IPR009000 -
Car05g03462 757 SUPERFAMILY ThrRS/AlaRS common domain 644 751 IPR018163 GO:0000166
Car05g03462 757 SUPERFAMILY Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 316 524 IPR018162 GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419
Car05g03462 757 PANTHER ALANYL-TRNA SYNTHETASE 80 751 - -
Car05g03462 757 Hamap Alanine--tRNA ligase [alaS]. 80 757 IPR023033 GO:0004813
Car05g03462 757 PRINTS Alanyl-tRNA synthetase signature 371 384 IPR002318 GO:0000166|GO:0005737
Car05g03462 757 PRINTS Alanyl-tRNA synthetase signature 347 363 IPR002318 GO:0000166|GO:0005737
Car05g03462 757 PRINTS Alanyl-tRNA synthetase signature 296 309 IPR002318 GO:0000166|GO:0005737
Car05g03462 757 PRINTS Alanyl-tRNA synthetase signature 269 280 IPR002318 GO:0000166|GO:0005737
Car05g03462 757 PRINTS Alanyl-tRNA synthetase signature 147 158 IPR002318 GO:0000166|GO:0005737
Car05g03462 757 Gene3D - 645 738 - -
Car05g03462 757 SUPERFAMILY Class II aaRS and biotin synthetases 81 315 IPR045864 -
Car05g03462 757 Gene3D Bira Bifunctional Protein; Domain 2 79 312 IPR045864 -
Car05g03462 757 TIGRFAM alaS: alanine--tRNA ligase 84 752 IPR002318 GO:0000166|GO:0005737
Car05g03462 757 Gene3D - 530 644 - -
Car05g03462 757 PANTHER ALANINE--TRNA LIGASE, MITOCHONDRIAL 80 751 - -
Car05g03462 757 Pfam tRNA synthetases class II (A) 84 646 IPR018164 GO:0000166|GO:0004813|GO:0005524|GO:0006419
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03462 Car-Chr5 79098166 79108196 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03462 K01872 - gmx:100788288 1166.76