Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03459 ATGTCTAAGGAGTCTGAGAATGAGAATGAGAATGAAACCCCTTCTACTCCCAAGCTTGATGATGGCTTCTATGAAATCGAAACCATACGCCGTAAGAGGCTCCGCAAGGGTGAGGTTCAGTACCTGATTAAATGGCGTGGGTGGCCTGAGACTGCCAATACTTGGGAGCCTCTTCAAAATCTACAGTCTGTACCTGATCTCATTCATGCCTTTGAGGATAGCCTCAAATCAGGAAAACATCGCAAGCGCAAACGCACCACCCATCTGCTTCCCAATCCCTTCCCCCCTTTACCTAATCACACCCCACAACTTCAACCTTCCACCACCCTTCCAACTCACTCTCAAACTAATACCGCCCTTGGTAATTCCAATATACTAAATACTACTTCACAACACATTGCTCAAACTAATCAGGAAAATGATTTCGATCTCAAGCTAAATCAACTCAAACCGACACCAAACACTGCAGACAACCTCGCTATACATTTTCAACAACCCAATGCTCATCTCGAATCTCAATCCAAGGGGGATTCCATTCAAAGTGACCGCTGTAGAGGAGCCAAAAGGAGAAAAACTGGTTCCGTCAAAAGGTTCAAGAAAGAGGAATCTGCATGTGAATCTCTTGATACAAAGAATGCAATTGGCATCTCTGTTACTGCACTTCAACAAGGCTTGTCAGAAAATGCTGGTTATCTGGGGAATAATACTCATCAAAAGATAGACGACACTAAGACTGCCTGCAATATTGTCAAGATTCTAAAGCCAATAGGCTATTCAGCTTCTCTATCTTGCTACATGCAGGATGTTAGAGTCACCTTTATGGCTATGAGGTCTGATGGAACAGAAGTGATGGTGGATAACAAATATCTGAAGACATACAATCCACTACTGCTGATCAATTTCTATGAGCAGCATCTCCGATACAATCCCACTTCTTAA 939 0.4313 MSKESENENENETPSTPKLDDGFYEIETIRRKRLRKGEVQYLIKWRGWPETANTWEPLQNLQSVPDLIHAFEDSLKSGKHRKRKRTTHLLPNPFPPLPNHTPQLQPSTTLPTHSQTNTALGNSNILNTTSQHIAQTNQENDFDLKLNQLKPTPNTADNLAIHFQQPNAHLESQSKGDSIQSDRCRGAKRRKTGSVKRFKKEESACESLDTKNAIGISVTALQQGLSENAGYLGNNTHQKIDDTKTACNIVKILKPIGYSASLSCYMQDVRVTFMAMRSDGTEVMVDNKYLKTYNPLLLINFYEQHLRYNPTS 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03459 312 MobiDBLite consensus disorder prediction 103 123 - -
Car05g03459 312 ProSiteProfiles Chromo and chromo shadow domain profile. 24 83 IPR000953 -
Car05g03459 312 MobiDBLite consensus disorder prediction 1 20 - -
Car05g03459 312 MobiDBLite consensus disorder prediction 1 15 - -
Car05g03459 312 SMART chromo_7 23 76 IPR000953 -
Car05g03459 312 Pfam Chromo (CHRromatin Organisation MOdifier) domain 24 73 IPR023780 -
Car05g03459 312 PANTHER CHROMO DOMAIN-CONTAINING PROTEIN LHP1 3 311 - -
Car05g03459 312 SUPERFAMILY Chromo domain-like 11 81 IPR016197 -
Car05g03459 312 Gene3D - 1 80 - -
Car05g03459 312 SMART ChS_2 238 311 IPR008251 GO:0005634
Car05g03459 312 MobiDBLite consensus disorder prediction 168 195 - -
Car05g03459 312 MobiDBLite consensus disorder prediction 76 123 - -
Car05g03459 312 ProSitePatterns Chromo domain signature. 41 61 IPR023779 -
Car05g03459 312 CDD CD_CSD 24 73 - -
Car05g03459 312 PANTHER CHROMO DOMAIN-CONTAINING PROTEIN LHP1 3 311 IPR044251 GO:0006325|GO:0031507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03459 Car-Chr5 79053588 79060762 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03459 - - cam:101503633 599.742