Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03458 ATGGAAGGAAAGAGAAGCAAGGTGCGTATGTGCTGCTTATGCAACCAATCAAGAGCTTCTCTTAATAGACCTAAAACCCTTCAACAGATTTGCAGAGATTGTTTCTACCTCTCTTTCGAAAATGAAATTCACCAACTCATCATTGATAATCACCTCTTCACTCCCGGCGACCGCGTCGCTATCGGCGCTTCCGGCGGTAAAGACTCCACCGTTCTCGCCTATGTTTTATCCAAACTCAACCGCGTTCACAATTACGGTCTCAATCTCTTCCTCCTCTCCGTTGACGAAGGCATCACCGGCTACCGCGACGATTCCCTCGAAACCGTTCACAGGAACCAGGTTCAGTTCGGATTACCTCTCAAAGTTGTATCCTACAAGGACTTGTACGGATGGACTATGGACGAGATCGTCAAACTCATCGGTCTCAAGAACAATTGCACTTTCTGTGGCGTCTTCCGTCGCCAGGCTCTCGATCGAGGCGCCGCTTTCCTCAAAGCCGATAAACTGGTAACCGGACACAACGCCGACGACATAGCAGAGACGGTTCTGTTGAACATATTAAGAGGAGATATAGCTAGATTAAGTAGATGCAGTTCAATAATAACAGGTGAAGACGGACCGATTCCTAGATGCAAACCTTTCAAGTACACTTACGAAAAAGAGATTGTTATGTATGCATATTTCAAGAGACTCGATTACTTTTCTACTGAATGCATTTATTCTCCAAATGCATATCGTGGTTTTGCTCGTGAGTTCATCAAGGATTTGGAGAGAATCAGACCAAGGGCCATTCTTGACATCATAAAATCCGGGGAGAATTTCAGGATTTCTACCAATACCAAAATGCCTGAGCAGGGAACCTGTGAACGATGTGGTTATATTTCTAGTCAGAAATGGTGTAAGGCTTGTGTCCTGCTTGATGGATTGAATCGAGGTTTGCCTAAACTGGGAATTGGTCGCAGTCGGCCTGGCATTGGCTGCAAGGAAGAAAATGAAAGCCGTGGAGTAAAGAGCATCGAGAGCAAACAATGTGGATCTTTGGACTTCTGA 1050 0.4543 MEGKRSKVRMCCLCNQSRASLNRPKTLQQICRDCFYLSFENEIHQLIIDNHLFTPGDRVAIGASGGKDSTVLAYVLSKLNRVHNYGLNLFLLSVDEGITGYRDDSLETVHRNQVQFGLPLKVVSYKDLYGWTMDEIVKLIGLKNNCTFCGVFRRQALDRGAAFLKADKLVTGHNADDIAETVLLNILRGDIARLSRCSSIITGEDGPIPRCKPFKYTYEKEIVMYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGENFRISTNTKMPEQGTCERCGYISSQKWCKACVLLDGLNRGLPKLGIGRSRPGIGCKEENESRGVKSIESKQCGSLDF 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03458 349 PIRSF ATPase_YdaO 6 318 IPR035107 GO:0008033
Car05g03458 349 PANTHER ATPASES OF THE PP SUPERFAMILY-RELATED 10 334 - -
Car05g03458 349 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 33 260 - -
Car05g03458 349 TIGRFAM TIGR00269: TIGR00269 family protein 208 307 IPR000541 GO:0000049|GO:0002098|GO:0034227
Car05g03458 349 Pfam Zinc-ribbon 286 316 IPR032442 -
Car05g03458 349 Hamap Cytoplasmic tRNA 2-thiolation protein 1 [CTU1]. 9 321 IPR000541 GO:0000049|GO:0002098|GO:0034227
Car05g03458 349 Gene3D HUPs 10 328 IPR014729 -
Car05g03458 349 CDD Alpha_ANH_like_II 58 244 - -
Car05g03458 349 Pfam PP-loop family 59 246 IPR011063 -
Car05g03458 349 PANTHER CYTOPLASMIC TRNA 2-THIOLATION PROTEIN 1 10 334 IPR000541 GO:0000049|GO:0002098|GO:0034227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03458 K14168 - gmx:100816096 620.928