Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03457 ATGTCATTCTCATCCATTTCTTCGCCACTCTCTTTCtcaatttcaataccttcctcccgttcactttcattttcaacttcaatttcTAAAAACCCTTTTCAATTTGTTAAATTGCAACAACATGGAGGAGGAGAAACAAAAAGAGGGGTGGTGGTGATGAGCTTGGAGGCAGGCATTGGAGTCATGGCTACCAAGTTGGGAATGATGAGTTTTTTCGAACCTAACGGAGAGGTTGTTCCCGTTACCGTTGTCGGTTTCAAAGAAGGCAACATTGTTACTCAGATCAAAACCGAAGCCACTGACGGTTACAGCGCCGTTCAAGTCGGTTACCGTAGGGTTAGGGACCGCAAATTGACCAAACCTGAAATGGGCCATCTTCAAAAGGTTGGTGCTATTCCTATGCGCCATCTTCAGGAATTTCGTCTTCAAAATGTTGACGGCTTTGACCTTAACCAGTCCCTTATCTTTGATCAACTTTTCAATGAGGGTGATCTTGTTGATGTCTCCGGCACCACCATCGGCAAGGGTTTCCAAGGTGGTATAAAGCGTCATAACTTTAAAAGGGGACCAATGAGCCATGGTTCCAAGAGTCATAGACAATTGGGATCAATTGGTGCGGGAACTACACCTGGACGTGTATACAAGGGAAAGAAGATGCCTGGTAGGATGGGTGGAACCAAGACGAAGATCAGAAAGCTTAAGATTGTCAAAATTGATAAAGATCTTAATGTCATCATGATCAAAGGTGCTCTTCCTGGTAAGCCCGGGAATCTTCTAAGGATAGCTCCTGCTAAGATTGTTGGCAAGAACATTCCAAAGAATTAA 825 0.4158 MSFSSISSPLSFSISIPSSRSLSFSTSISKNPFQFVKLQQHGGGETKRGVVVMSLEAGIGVMATKLGMMSFFEPNGEVVPVTVVGFKEGNIVTQIKTEATDGYSAVQVGYRRVRDRKLTKPEMGHLQKVGAIPMRHLQEFRLQNVDGFDLNQSLIFDQLFNEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDKDLNVIMIKGALPGKPGNLLRIAPAKIVGKNIPKN 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03457 274 SUPERFAMILY Translation proteins 59 270 IPR009000 -
Car05g03457 274 Gene3D - 91 149 - -
Car05g03457 274 PANTHER 50S RIBOSOMAL PROTEIN L3-1, CHLOROPLASTIC 53 273 - -
Car05g03457 274 Hamap 50S ribosomal protein L3 [rplC]. 58 265 IPR019927 GO:0003735|GO:0005840|GO:0006412
Car05g03457 274 Gene3D Translation factors 186 266 - -
Car05g03457 274 MobiDBLite consensus disorder prediction 185 225 - -
Car05g03457 274 PANTHER 50S RIBOSOMAL PROTEIN L3 53 273 IPR019927 GO:0003735|GO:0005840|GO:0006412
Car05g03457 274 ProSitePatterns Ribosomal protein L3 signature. 160 183 IPR019926 -
Car05g03457 274 Pfam Ribosomal protein L3 152 240 IPR000597 GO:0003735|GO:0005840|GO:0006412
Car05g03457 274 TIGRFAM L3_bact: 50S ribosomal protein uL3 60 261 IPR019927 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03457 Car-Chr5 79044904 79046397 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03457 K02906 - gmx:100802392 424.861