Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03449 ATGGCCGCTTCGGGCATCGCAGGAGCAGGACTCACCCTCAATTGCTTTTCTACTTCAACAACCAGATGTCGTACTCGTACTCGTTTTCGTTCTCGAACAATGGCCGTTTCCACCGACCAGAAACCACAAACCGACAAACTCATTCTTCGCAAGTCCGAAGAAGCTTTCGCCGCTGCCAAGGAATTGATGCCCGGAGGTGTTAACTCTCCAGTTCGTGCGTTCAAATCAGTTGGTGGACAACCCATTATCATTGATTCCGTTAAAGGTTCTCGGATGTGGGATATTGATGGCAATCAATACATTGACTACGTTGGTTCTTGGGGTCCTGCTATCATTGGCCATGCTGATGACAAGGTGCTTGCGGCTCTGGCTGAAACAATGAAGAAAGGCACCAGCTTTGGTGCACCTTGTCTTTTGGAAAACACTCTAGCAGAGATGGTTATTTCTGCTGTTCCCAGCATTGAAATGGTGAGATTTGTAAATTCAGGCACAGAAGCATGCATGGGTGCACTCCGTCTGGCGCGAGCTTATACTGGCAAAGAGAAGATCATCAAGTTTGAGGGTTGTTATCATGGCCACGCTGATCCTTTTCTTGTTAAGGCTGGCAGTGGAGTTGCAACCTTAGGACTTCCTGATTCCCCTGGTGTTCCTAAAGCTGCCACTTTTGAAACCCTAACGGCCCCTTTCAATGACTTCTCTGCTGTTGAGGAGCTCTTTGAGGCCAATAAAGGAGAGATTGCCGTAGTTTTCCTCGAAGCTGTTGTTGGAAATTCTGGTTTCATTACTCCTAAACCTGATTTTCTCAGTTCCTTGCGAAAAATCACTAAGGAGAACAATGCCCTTCTTGTGTTTGATGAAGTTATGACTGGATTTCGATTGTCATACGGAGGTGCTCAAGAATATTTTGGAGTAACTCCTGATATAACAACTTTGGGGAAGATTATTGGAGGGGGATTGCCAGTAGGTGCATATGGAGGGAGGAGGGATATTATGGAGACGGTGGCTCCGGCTGGACCTATGTACCAGGCAGGGACATTGAGTGGTAACCCTTTGGCCATGACTGCAGGCATAGAGACTCTGAAGCGTATTAAGGAGCCAGGAACTTACGAATACTTGGACAAGATTACAGGTGAGCTTGTTCAGGGCATTGTTGAAGCTGGTAAGAGAGCAGGGCATGCAATATGTGGTGGACATATAAATGGGATGTTTGGGTTTTTCTTCACAGAAGGACCTGTCTACAATTTTACAGATGCTAAAAAGAGTGACACTGCCAAGTTTGCTAGGTTCTTTTGGGGTATGTTAGCAGAAGGTGTCTATTTGGCACCTTCACAGTTTGAGGCTGGGTTCACCAGCTTGGCACATACTTCCGACGACATCAAAAAGACGATAGCTGCTGCTGAGAAGGTCTTCAGAGAGATCTGA 1422 0.4655 MAASGIAGAGLTLNCFSTSTTRCRTRTRFRSRTMAVSTDQKPQTDKLILRKSEEAFAAAKELMPGGVNSPVRAFKSVGGQPIIIDSVKGSRMWDIDGNQYIDYVGSWGPAIIGHADDKVLAALAETMKKGTSFGAPCLLENTLAEMVISAVPSIEMVRFVNSGTEACMGALRLARAYTGKEKIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKAATFETLTAPFNDFSAVEELFEANKGEIAVVFLEAVVGNSGFITPKPDFLSSLRKITKENNALLVFDEVMTGFRLSYGGAQEYFGVTPDITTLGKIIGGGLPVGAYGGRRDIMETVAPAGPMYQAGTLSGNPLAMTAGIETLKRIKEPGTYEYLDKITGELVQGIVEAGKRAGHAICGGHINGMFGFFFTEGPVYNFTDAKKSDTAKFARFFWGMLAEGVYLAPSQFEAGFTSLAHTSDDIKKTIAAAEKVFREI 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03449 473 ProSitePatterns Aminotransferases class-III pyridoxal-phosphate attachment site. 282 318 IPR005814 GO:0008483|GO:0030170
Car05g03449 473 Gene3D Aspartate Aminotransferase, domain 1 54 466 IPR015422 GO:0003824
Car05g03449 473 PANTHER BNAA09G06670D PROTEIN 30 471 - -
Car05g03449 473 PANTHER GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE 30 471 - -
Car05g03449 473 Hamap Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 51 473 IPR004639 GO:0033014|GO:0042286
Car05g03449 473 SUPERFAMILY PLP-dependent transferases 51 472 IPR015424 -
Car05g03449 473 CDD OAT_like 56 470 IPR005814 GO:0008483|GO:0030170
Car05g03449 473 Gene3D - 117 365 IPR015421 GO:0003824
Car05g03449 473 Pfam Aminotransferase class-III 81 390 IPR005814 GO:0008483|GO:0030170
Car05g03449 473 TIGRFAM hemL: glutamate-1-semialdehyde-2,1-aminomutase 51 472 IPR004639 GO:0033014|GO:0042286
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03449 Car-Chr5 78984911 78986977 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03449 K01845 - gmx:547795 823.157