Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03442 ATGGGTGCTTTGGATCACATTTCTGAGCTATTTGACTGCTCCGGAGGTTCTCACCACAAAAAGCGCAAACAATTGCAGacggtggaagtgaaagtgaagatgGATTGCGAAGGATGCGAGAGGAAAGTGAGAAAGGCGGTTGAAGGAATGAAAGGAGTGAACCAAGTGGATATTGACAGAAAGGCCTCCAAGGTAACCGTTGTGGGATATGTAGAACCTTCCAAAGTGGTGGCGCGTATCGCTCACCGCACTGGGAAGAGGGCAGAGATATGGCCATATATCCCATACGACGCCGTTGCTCATCCCTACGCACAAGGTGTTTACGATAGGAAAGCCCCTTCAGGTTACGTTCGGAATACATACGGTGAGTCTCAGTATCCAAATCTAGCGCGTGCAAGCTCCACCGAAGTCCGCTACACCACCGCTTTCAGCGACGAGAACCCAGCCGCCTGTGCTGTCATGTGA 465 0.486 MGALDHISELFDCSGGSHHKKRKQLQTVEVKVKMDCEGCERKVRKAVEGMKGVNQVDIDRKASKVTVVGYVEPSKVVARIAHRTGKRAEIWPYIPYDAVAHPYAQGVYDRKAPSGYVRNTYGESQYPNLARASSTEVRYTTAFSDENPAACAVM 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03442 154 CDD HMA 29 89 IPR006121 GO:0046872
Car05g03442 154 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 2 154 IPR045181 GO:0046872
Car05g03442 154 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 26 2 154 - -
Car05g03442 154 SUPERFAMILY HMA, heavy metal-associated domain 25 92 IPR036163 GO:0046872
Car05g03442 154 Pfam Heavy-metal-associated domain 30 85 IPR006121 GO:0046872
Car05g03442 154 Gene3D - 14 92 - -
Car05g03442 154 ProSiteProfiles Heavy-metal-associated domain profile. 34 90 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03442 Car-Chr5 78912558 78913835 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03442 - K10752 gmx:100780624 270.396