Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03430 ATGTCTTACCCTCCAACAGATTGGTCTCATCAAAATGATAGTGGAAGTTTTAGAAGTCCAGACACGCTATGTACTGTGGCAGAAATTGAGGAATTTGATTTCTCTAAAGTGTTAGATAGGCCAAGGATTACAAACATAGAGAGACAAAGATCATGTGATGAAAGATCGATGAATGAACTATCAATAGGCTTATCACCGCGTCAATCGTCAACCAAAGCTGACAACATTTCTCGCCTCGGAGAACATGTTGATAATGTATTGTCTCCTCTGCAAAAATCAGGTCTTAATACTCCAAGATCACTGACATTGGACCCTCATTCAATAATGCCTGAAGCTTGGGAAGCATTGAGGCGTTCCTTGGTACATTTTCGTGGTGAGCCAGTTGGGACAATTGCTGCCTTGGACAATTCTGATGAGAAGCTTAATTATGACCAGGTTTTTGTAAGAGACTTTGTCCCAAGTGCTCTGGCTTTTTTGATGCATGGGGAACCAGACATTGTTAAAAACTTTATCTTAAAGACTCTTCGTCTTCAATCGTGGGAGAAAAAGATTGATAGGTTCCAGCTAGCAGAAGGAGTAATGCCTGCTAGTTTTAAGGTATTCCATGATCCAGTCAGAAACCGCGAGACCCTGATAGCAGATTTTGGTGAAAGTGCAATAGGCAGAGTTGCTCCTGTTGATTCTGGATTTTGGTGGATTATATTACTTCGTGCATACACAAAATCTACAGGAGACTCTTCTTTGGCCGAGCGGCCTGAATGTCAAAAGGGTATGCGTTTGATTCTGAGTTTATGCTTGTCCGAGGGGTTTGATACATTTCCGACGTTACTATGTGCTGATGGGTGCTGTATGATTGATCGTAGAATGGTGCGTTTTCTGAACTTATTACATAATCTACTCTATCATATGAGAAGCCATTTTTGGTTGGATTTGAAGCAACTTAATGATGTATATCGCTTCAAAACGGAAGAGTACTCACATACAGCAGTCAACAAGTTTAATGTTATACCTGATTCATTACCGGATTGGATTTTTGATTTCATGCCTCATCATGGTGGATACTTTATTGGGAATGTCAGTCCAGCAAGGATGGATTTCCGCTGGTTTTGCCTGGGTAATTGCATGGCAATTTTGTCATGCTTGGCAACTCCTGAACAGTCAGTTGCGATCATGGATCTCATAGAATCACGATGGGAGGAATTAATTGGAGAAATGCCTGTCAAAGTTTGTTATCCAGCCCTTGAAAGCCATGAATGGAGGATCATCACAGGATCTGACCCAAAAAATACTAGATGGAGTTACCACAACGGGGGATCTTGGCCAGTTCTGTTATGGCTTTTGTCTGCGGCAGCCATCAAAACTGGGCGACCCCAAATTGCAAAACGTGCCCTTCAAATTGCGGAGGCCAAATTGCTAAAAGACAACTGGCCTGAATATTATGATGGAACGCTTGGTCGATACATTGGGAAGCAGGCTCGAAAATGCCAAACTTGGTCTATTGCTGGTTACCTGGTGGCTAGGATGATGCTTGATGATCCTTCACATATAGGTATTATATCACTCGAAGAAGACAGACAGCTAAAGCCTTTGCTCAAGAGATCAAATTCATGGACTTTGTGA 1620 0.4198 MSYPPTDWSHQNDSGSFRSPDTLCTVAEIEEFDFSKVLDRPRITNIERQRSCDERSMNELSIGLSPRQSSTKADNISRLGEHVDNVLSPLQKSGLNTPRSLTLDPHSIMPEAWEALRRSLVHFRGEPVGTIAALDNSDEKLNYDQVFVRDFVPSALAFLMHGEPDIVKNFILKTLRLQSWEKKIDRFQLAEGVMPASFKVFHDPVRNRETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLAERPECQKGMRLILSLCLSEGFDTFPTLLCADGCCMIDRRMVRFLNLLHNLLYHMRSHFWLDLKQLNDVYRFKTEEYSHTAVNKFNVIPDSLPDWIFDFMPHHGGYFIGNVSPARMDFRWFCLGNCMAILSCLATPEQSVAIMDLIESRWEELIGEMPVKVCYPALESHEWRIITGSDPKNTRWSYHNGGSWPVLLWLLSAAAIKTGRPQIAKRALQIAEAKLLKDNWPEYYDGTLGRYIGKQARKCQTWSIAGYLVARMMLDDPSHIGIISLEEDRQLKPLLKRSNSWTL 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03430 539 Pfam Alkaline and neutral invertase 112 289 IPR024746 GO:0033926
Car05g03430 539 Pfam Alkaline and neutral invertase 294 513 IPR024746 GO:0033926
Car05g03430 539 PANTHER ALKALINE/NEUTRAL INVERTASE B-RELATED 293 538 - -
Car05g03430 539 SUPERFAMILY Six-hairpin glycosidases 115 506 IPR008928 GO:0005975
Car05g03430 539 PANTHER ALKALINE/NEUTRAL INVERTASE B-RELATED 12 289 - -
Car05g03430 539 PANTHER - 293 538 IPR024746 GO:0033926
Car05g03430 539 PANTHER - 12 289 IPR024746 GO:0033926
Car05g03430 539 Gene3D - 286 511 IPR012341 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03430 Car-Chr5 78808185 78811989 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03430 - - lja:Lj1g3v3343910.1 962.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03430 05 78808185 78811989 Car05g03430 05 78808185 78811989 ECH