Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03418 ATGGCATTGGGCAAACCGTTATTGAAATTGTGCGTATTTGTTGCGGTGCTTGTGGTGGTCATTGGAGGAAGCAGCGGTGCACATGATTATCAGGAGGCATTATCGAAGGCGATACTCTTCTTCGAAGGACAACGATCGGGGTTTCTGCCGGAGGACCAGAGATTGAAGTGGCGTGGGAATTCGGGTCTCAGTGATGGGTGGAATTACAACTTCGACCTTACCGGCGGGTATTACGACGCCGGTGATAATGTGAAATTTGGGTTTCCGATGGCATTCACGACGACAATGTTGTCGTGGAGTGTAATTGAATTCGGTGACAACATGCCTCCCAATGAACTCAGAAACGCTTTGGTCGCAATTCGTTGGAGTACTGATTATTTGTTGAAGACCGTTTCTCAGCCCAATCGCATTTTCGTTCAGGTGGGTGACCCAATCGCAGACCACAACTGCTGGGAGAGGCCAGAAGACATGGACACAAGCAGGAGTGTGTATGCTATTGATGCACCTAACCCAGCTTCGGATGTCGCCGGCGAAACCGCAGCTGCCCTTGCCGCTTCATCCATGGCATTCCGATCATCGGACCCTGGTTATTCAGAGACATTACTCCGAAGTGCTGTTAAGGCCTTCGAATTTGCAGATAGTTACAGGGGTGCATACAGTGACAATGCTAATGTTAAGGATGGTGTCTGCCCTTTTTATTGTGATTTTGATGGATACCAGGACGAATTGTTATGGGGTGCCGCATGGTTAAGGAGGGCGACACAAGATGAAAATTTCCTCAACTACATTCAAAGCAATGGTAAAACACTTGGTGCTGAAGACAACATAAATGAATTTGGTTGGGACAACAAGCATGCTGGCCTCAACGTTCTTGTCTCCAAGGAAGTCCTAGAAGGAAATGTATATTCTCTTGACTCTTACAAGGCATCAGCAGAGAGCTTCCTATGCACACTAATACCAGAAACATCAAGTTCACACATAGAGTACACTCCTGGTGGACTCATATACAGACCAGGTGGAAGCAATTTACAACATGCAACATCAATTGCATTCCTCGAATTAGTCTACGCCAATTACTTATCTCGCACGTCACAATCCATCAACTGTGGTAACGTTTATGTTAGTGCACAAACACTTCGTGAACGTGCTAAGAGACAAGTTGATTACATTTTAGGTGATAATCCATTGGGTTTATCTTACATGGTTGGTTATGGTAACAATTATCCACAACGTATTCATCACCGTGGTTCATCTTTACCTAACATTAAGGATCATCCTCAAAAGATTGCTTGCAAAGAAGGTTCAATTTACTTCAATTCAACAAATCCTAACCCAAATGTTCTTGTTGGAGCCATTGTGGGCGGACCTGGTGAAGATGATGTTTATATGGATGACAGGGCTGATTATATAAAGTCTGAGCCAACCACATATATTAATGCACCATTTGTTGGGGTTTTAGCATACTTTGCTAATAATAATAATCCTAATTAA 1491 0.44 MALGKPLLKLCVFVAVLVVVIGGSSGAHDYQEALSKAILFFEGQRSGFLPEDQRLKWRGNSGLSDGWNYNFDLTGGYYDAGDNVKFGFPMAFTTTMLSWSVIEFGDNMPPNELRNALVAIRWSTDYLLKTVSQPNRIFVQVGDPIADHNCWERPEDMDTSRSVYAIDAPNPASDVAGETAAALAASSMAFRSSDPGYSETLLRSAVKAFEFADSYRGAYSDNANVKDGVCPFYCDFDGYQDELLWGAAWLRRATQDENFLNYIQSNGKTLGAEDNINEFGWDNKHAGLNVLVSKEVLEGNVYSLDSYKASAESFLCTLIPETSSSHIEYTPGGLIYRPGGSNLQHATSIAFLELVYANYLSRTSQSINCGNVYVSAQTLRERAKRQVDYILGDNPLGLSYMVGYGNNYPQRIHHRGSSLPNIKDHPQKIACKEGSIYFNSTNPNPNVLVGAIVGGPGEDDVYMDDRADYIKSEPTTYINAPFVGVLAYFANNNNPN 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03418 496 Gene3D - 27 493 IPR012341 GO:0005975
Car05g03418 496 Pfam Glycosyl hydrolase family 9 30 486 IPR001701 GO:0004553|GO:0005975
Car05g03418 496 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 462 480 IPR033126 -
Car05g03418 496 PANTHER ENDOGLUCANASE 24 11 494 - -
Car05g03418 496 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 389 415 IPR018221 -
Car05g03418 496 PANTHER ENDO-1,4-BETA-GLUCANASE 11 494 - -
Car05g03418 496 SUPERFAMILY Six-hairpin glycosidases 12 491 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03418 Car-Chr5 78699411 78704935 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03418 5 494 Glycoside Hydrolase AT1G70710 59.592 0.0 609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03418 K01179 - gmx:100799911 883.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03418 05 78699411 78704935 Car05g03418 05 78699411 78704935 ECH