Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03403 ATGGAACAGGCTAATGGGTTGGCAGAATCATCGGTAGTATCTTGGCCATCACCTACAAAACCATCCTTGCCTTCAACTTCATTGTCAGCATCTCCTTTATCATCCCAATATCACATGCTTCCACCTAGCTTGACCCCATCAAGGTGGCCTGGCCATTCCCCTGGACACAAGATGTTATGGCAAATTTCTGATATCCGAGCGCCAGCATGTAAGTCGCCTGGCAGCTACTCTCTATCTGAGGAAAGACCAATGTTTCCTTCATGGAGCAATGGATCAAGAATGTGCTCCCGTGGGGGATCTTCAGATGGTTGGTCTATACCTGGCTTTTCTGAACTTATTGGAACTCCACACAGAGAAAGATGGTCATTTGATAGTGAGTCATTTGGTTCTAATCGTGAAAAGTTAGCTAGATCCAGTAGTTGGTTTTCAGTGTCACCAGTTGATTTGCAAAAATGTGGCTTTTGCTCAAAGGTTTTAATTGAGAAATCTCCTTGGGGCGCCCAAAAGATTATTGCAAATAATGACCTTTCTGTAGTTGCTGTTCTTATCTGTGGACACATCTATCATGCTGAATGTTTGGAGAATATGACATCTGATATCAATAAGTACGACCCAGCTTGCCCAGTTTGCAGCTTTGGTGAGAAACAAACTATGATGTTGTCCAAAAAAGTTCTGAAAGCTGAAATGGATTTGAAGGCTAGAAACAAGGCATCAAAGAATTGGGCTGAGGACAGTACAGATATTGATGACGATTCTGTTGTGCTCGATAACCTTAAAGGGAGAGGGCAGAAAGGTAAAGGTCCTCGAATGGACTCCAGTTCTCGTGGGAGGATCTCCTTTGGAAAACCTTTTCTGAAACGACACTTTTCATTTGGATCGAAAGGTTCCAGATCCATGTTAGATAGTCACCCTACAAAAAAGAAGGGCTTCTTTTGGGCAAAATCTAGCAAAGCATAA 957 0.4284 MEQANGLAESSVVSWPSPTKPSLPSTSLSASPLSSQYHMLPPSLTPSRWPGHSPGHKMLWQISDIRAPACKSPGSYSLSEERPMFPSWSNGSRMCSRGGSSDGWSIPGFSELIGTPHRERWSFDSESFGSNREKLARSSSWFSVSPVDLQKCGFCSKVLIEKSPWGAQKIIANNDLSVVAVLICGHIYHAECLENMTSDINKYDPACPVCSFGEKQTMMLSKKVLKAEMDLKARNKASKNWAEDSTDIDDDSVVLDNLKGRGQKGKGPRMDSSSRGRISFGKPFLKRHFSFGSKGSRSMLDSHPTKKKGFFWAKSSKA 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03403 318 PANTHER EXPRESSED PROTEIN 5 312 - -
Car05g03403 318 SUPERFAMILY RING/U-box 151 212 - -
Car05g03403 318 MobiDBLite consensus disorder prediction 1 31 - -
Car05g03403 318 PANTHER BNAA09G43140D PROTEIN 5 312 - -
Car05g03403 318 ProSiteProfiles Zinc finger RING-type profile. 152 211 IPR001841 -
Car05g03403 318 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 134 212 IPR013083 -
Car05g03403 318 CDD RING-H2 177 211 - -
Car05g03403 318 MobiDBLite consensus disorder prediction 257 277 - -
Car05g03403 318 MobiDBLite consensus disorder prediction 257 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03403 Car-Chr5 78570821 78573522 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03403 - - gmx:100778123 467.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03403 05 78570821 78573522 Car05g03403 05 78570821 78573522 ECH