Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03379 ATGGGAATCGTTATCGGAGCCGCAAACGGCGACATTCCAAGTCTAGCATCCGATCCAAACGCGGCAACTCAGTGGATTAACTCGAATGTTTTACCTTATTATCCAGCCAGTAACATCACTTTAATCACCGTCGGGAACGAGGTTTTAACCTCCGGCGATCAAGGTCTAGTGTCGCAGCTCGTGCCTGCAATTCGAAATGTCCAAAGTGCCCTGAGTTCAGCTTCACTCGGCGGAAGGGTGAAAGTATCCACCGTGCATTCAATGGCCGTGTTGATTCAGTCGGATCCACCTTCTTCCGGATCGTTCAACCCGGCGTTACAACAAACCATGAATCAGTTATTGGCGTTTCTGAGGGATAATAAATCGCCGTTTATGATAAATCCGTATCCTTATTTTGCTTACCAGACTGACCCGAGACCCGAAACGCTAGCGTTCTGTCTATTTCAGCCAAATTCGGGTCGGGTTGACTCGGGTAACGGAAAGCTTTACACCAACATGTTCGACGCTCAGGTTGATGCCGTGCATTCTGCTCTGAGTGCTAAGAGGTATGAGGACATAGAGATTGTGGTTGCTGAAACAGGATGGCCTTCTAGAGGGGACAGCAATGAAGTAGGACCAAGTGTTGAAAATGCAAGTGCCTATAATGGAAACTTGATTACTCATCTTAGATCATTGGTTGGAACACCTTTGATACCTGGGAAGTCTGTGGACACATACATTTTTGCACTCTATGATGAGGACCTCAAATCTGGCCCAGGATCTGAACGCGCCTTCGGCCTCTTCAAACCTGATCTTTCCATGTCATATGATGTTGGCTTGGCCAAGTCTACCCACCAGACACCAGCTGGATGGTGTATTCCTAAAGCAGGAGTCAGTGATACTCAGTTGCAGTCCAACATTGACTATGCATGTGGGCAAGGCATAGATTGTGGGCCAATAAAACCAGGAGGTGCATGTTTTGAACCCAACACGGTAGCATCCCATGCTGCCTTTGTAATGAATCTCTACTACCAAACATTTGGCAGAAATCAATGGAACTGCGATTTCTCTCAAACAGCAACACTCACTTCCCAAAATCCAAGTTACAATGCTTGCATTTACACTGGATGA 1110 0.4676 MGIVIGAANGDIPSLASDPNAATQWINSNVLPYYPASNITLITVGNEVLTSGDQGLVSQLVPAIRNVQSALSSASLGGRVKVSTVHSMAVLIQSDPPSSGSFNPALQQTMNQLLAFLRDNKSPFMINPYPYFAYQTDPRPETLAFCLFQPNSGRVDSGNGKLYTNMFDAQVDAVHSALSAKRYEDIEIVVAETGWPSRGDSNEVGPSVENASAYNGNLITHLRSLVGTPLIPGKSVDTYIFALYDEDLKSGPGSERAFGLFKPDLSMSYDVGLAKSTHQTPAGWCIPKAGVSDTQLQSNIDYACGQGIDCGPIKPGGACFEPNTVASHAAFVMNLYYQTFGRNQWNCDFSQTATLTSQNPSYNACIYTG 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03379 369 Gene3D Glycosidases 1 279 - -
Car05g03379 369 SUPERFAMILY (Trans)glycosidases 1 271 IPR017853 -
Car05g03379 369 Pfam Glycosyl hydrolases family 17 2 271 IPR000490 GO:0004553|GO:0005975
Car05g03379 369 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 2 363 IPR044965 GO:0004553|GO:0005975
Car05g03379 369 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 7 2 363 - -
Car05g03379 369 SMART X8_cls 283 367 IPR012946 -
Car05g03379 369 ProSitePatterns Glycosyl hydrolases family 17 signature. 186 199 IPR000490 GO:0004553|GO:0005975
Car05g03379 369 Pfam X8 domain 284 354 IPR012946 -
Car05g03379 369 Gene3D - 280 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03379 Car-Chr5 78394519 78399256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03379 1 367 Miscellaneous Gene Families AT2G16230 66.667 0.0 539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03379 - - cam:101494808 753.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03379 05 78394519 78399256 Car05g03379 05 78394519 78399256 ECH