Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03367 ATGGCTGAGGCCAAAACAGCTGCTGCTGATCAGATTATTATGTCTCTTGAAGATTTCGATCCTCAAAAGAAAAAACCCGAATCCAACAAGTTTGCTTTTGCCTGTGCTATCTTGGCTTCCATGACTTCCATTTTACTTGGTTACGATATTGGGGTGATGAGTGGAGCAGTGATATACATAAGAAGGGACCTGAAACTATCAGACGTGCAAATAGAAATCTTGGTAGGAATCATCAACCTTTTCTCTTTGATAGGTTCCTGCCTCGCCGGAAGAACCTCTGACTGGATTGGTCGCCGCTACACCATTGTACTAGCCGGTGCTATCTTCTTTGCTGGAGCAATCCTCATGGGATTCTCTCCCAACTTTCCCTTTCTCATGTTCGCCCGCTTCATTGCCGGCATTGGCATTGGCTACGCTCTCATGATTGCCCCTGTCTACACCGCCGAGGTCTCTCCTGCTTCCTCTCGCGGCTTCCTCACCTCCTTCCCTGAGGTATTCATCAATGGAGGGATATTACTTGGATACATTTCAAACTACGGATTTTCGAAACTTCCACTTGAGTTAGGATGGAGAGTGATGCTCGGAATCGGAGCGATCCCTTCCGTAATCTTAGCCGTTGGAGTGTTAGCGATGCCTGAGTCACCTCGTTGGCTCGTTATGAAAGGGAGACTCGGTGACGCTATCAAAGTTCTTAACAAAACCTCTGATTCCGAACAAGAGGCTCGGCTTAGGCTCATTGAAATCAAAGCTGCGGCTGGGATCCCTGAGAGTTGCAACGACGACGTCGTTTCAGTAAATAAAACCAACGAAGGAGAGGGTACTACTGTATGGAAAGACTTGTTTCTTTATCCTACACCTGCAGTGCGTCACATTGTGATTGCTGCTCTTGGTATTCACTTCTTTCAACAAGCTTCGGGTATAGACGCTGTCGTTTTGTATAGTCCCACAATTTTTCGTAAAGCTGGCCTTGAATCTGATACGGAGCAGTTACTTGCAACCGTTGCCGTTGGATTGTGTAAAACCGTTTTCATTTTAGTGGCTACTTTTTTGTTGGATCGGGTCGGGCGTCGACCCTTATTGTTGTCAAGTGTTGGTGGAATGGTGATTTCGTTGCTTACTCTTGCGGTGAGTCTCACGGTCGTTGATCATTCGCACGTCAGGAAAATGTGGGCCGTTGGATTGAGTATTGTTTCCGTGTTGTCCTACGTGGCAACGTTTTCAATTGGAGCGGGTCCCATTACTTGGGTTTATAGCTCTGAGATATTTCCGTTGCGGCTACGCGCTCAAGGTGCGTCTGCGGGTGTGGTGGTGAATAGGGTGACGAGTGGAATAATTTCAATGACGTTTTTGTCGTTATCTGATAAGATCAGTATTGGAGGGGCTTTCTTCCTCTTTGGTGGAATTGCAGCTTGTGGATGGATCTTCTTCTATGCATTGTTACCTGAAACACAAGGTAAGACGCTTGAGGAAATGGAAGGCTCTTTTGGTAAATTCGGAGTGAAGTTAAGCACCAAGAATGATAATGGGGAGATCCAATTCACCAATAATAATTAA 1554 0.4607 MAEAKTAAADQIIMSLEDFDPQKKKPESNKFAFACAILASMTSILLGYDIGVMSGAVIYIRRDLKLSDVQIEILVGIINLFSLIGSCLAGRTSDWIGRRYTIVLAGAIFFAGAILMGFSPNFPFLMFARFIAGIGIGYALMIAPVYTAEVSPASSRGFLTSFPEVFINGGILLGYISNYGFSKLPLELGWRVMLGIGAIPSVILAVGVLAMPESPRWLVMKGRLGDAIKVLNKTSDSEQEARLRLIEIKAAAGIPESCNDDVVSVNKTNEGEGTTVWKDLFLYPTPAVRHIVIAALGIHFFQQASGIDAVVLYSPTIFRKAGLESDTEQLLATVAVGLCKTVFILVATFLLDRVGRRPLLLSSVGGMVISLLTLAVSLTVVDHSHVRKMWAVGLSIVSVLSYVATFSIGAGPITWVYSSEIFPLRLRAQGASAGVVVNRVTSGIISMTFLSLSDKISIGGAFFLFGGIAACGWIFFYALLPETQGKTLEEMEGSFGKFGVKLSTKNDNGEIQFTNNN 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03367 517 ProSitePatterns Sugar transport proteins signature 2. 131 156 IPR005829 GO:0016021|GO:0022857|GO:0055085
Car05g03367 517 ProSiteProfiles Major facilitator superfamily (MFS) profile. 35 484 IPR020846 GO:0022857
Car05g03367 517 PRINTS Sugar transporter signature 43 53 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car05g03367 517 PRINTS Sugar transporter signature 126 145 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car05g03367 517 PRINTS Sugar transporter signature 302 312 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car05g03367 517 PRINTS Sugar transporter signature 396 417 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car05g03367 517 PRINTS Sugar transporter signature 419 431 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car05g03367 517 CDD MFS_PLT 38 491 IPR044776 GO:0005351
Car05g03367 517 Pfam Sugar (and other) transporter 35 493 IPR005828 GO:0016021|GO:0022857|GO:0055085
Car05g03367 517 Gene3D MFS general substrate transporter like domains 25 497 IPR036259 -
Car05g03367 517 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 18 509 IPR045262 GO:0015144
Car05g03367 517 ProSitePatterns Sugar transport proteins signature 1. 89 106 IPR005829 GO:0016021|GO:0022857|GO:0055085
Car05g03367 517 PANTHER SUGAR TRANSPORTER 18 509 - -
Car05g03367 517 SUPERFAMILY MFS general substrate transporter 16 492 IPR036259 -
Car05g03367 517 TIGRFAM SP: MFS transporter, sugar porter (SP) family 25 491 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03367 Car-Chr5 78305778 78308078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03367 3 517 Organic Solute Cotransporters AT3G18830 69.574 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03367 - - gmx:102670364 812.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03367 05 78305778 78308078 Car05g03367 05 78305778 78308078 ECH