Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03361 ATGGCAACCAAATCGCCGGACAGACCAGCCGAGCCTCCGTCTATCGCCACCGATACTCCGTCTATCGCCGTCGAAGCTCCATCAACCGCAGCCGAAACTCCATCTACCGCCGCCGAAACGCCtcaaactcaacttcaaccttcgacttctactcctccttcTGCAAAGCCGCTACCACCGACGGCGAAACCAGAGGTCCCATTGCCAGAATCCAAAACGTCAAACGATCCAAGCTTAATCTTAGTCCCAAGTCACTCGAGATGGTTCTCATGGGATTCAATTCACGAATGCGAAATCCGTCTCATTCCAGACTCTTCCAAGAACCCTAGGGTTTACAAATACTACAGAAACTCCATCGTTAAAATTTTCAGATTCAATCCCAACAGAAAAATAACATTCACGGATGTCCGCAAAACGCTCGTTGGTGACGTCGGTTCAATCCGAAGAGTCTTCGATTTTCTGGAAGCTTGGGGTTTAATCAATTACCATCCTTCTTCGGCGCTCAGTAAACCCTTCAAATGGGAAGACAAAGAATCCAAAACCGACTCAACATCAAATTCCACGGAATCTCCTTCTCCGGCGCCTGTCAGAGAAACCGCTAAGAGAGTTTGCAGTGGTTGCAAAGCTCTCTGTGCCATTGCTTGTTTTGCCTGTGATAAGCATGATATGACTCTCTGTGCGAGGTGTTTTGTTCGCGGCAACTATAGAGTTGGTATGAGTAATTCAGATTTCAAGAGAGTGGAGATAAGTGACGAGACCAAGACCGAATGGACTGAGAAGGAAACACTGAATCTTCTTGAAGCTATTACCAAATTTGGTGATGATTGGAAGAAGGTTTCTCACAATGTTGTTGGTAGGACTGAGAAGGAATGCGTTGCTCGTTTTCTCAAGCTTCCTTTTGGTGATCAATTTCTGCATTATCAACACTCAGTGTCTGCTCCTCTCACTGATGATGGTTCTGATCAGTTGAAGCCTTCTGCTGATGCTGATTGTGAATCTGAAACTGTTGCCTCAGCTAAATCTAATAAGAGAATGCGTCTCACACCTCTTGCAGATGCAAGCAATCCTATTATGGCTCAGGCTGCTTTTCTTTCTGCTTTGGCAGGGACAGAGGTTGCCCAAGCTGCGGCTCAAGCTGCACTGACAAGTCTGTCTGATCTTTATAAGTCAACTAGAATTAATTATCGGTCATTTCCAAAGAATACATTGCATCAAGATGCTGGTGTGACATCTAACGGTGGTAATGCTTCAAATTCTATTGAAGGATCTCTACTGCGTGCAAATATACAGTGTGAGAAAGAAGAATCAGATGTGGAAAAAGCAATTTCTGATATTATAGCAGTTCAGATGAAAGATATCCAAGACAAGGTTATTAATTTTGAGGATTTAGACCTGCTAATGGAAAAAGAACGCCTGCAGTTGGAGCAGGTGAAGAATTTGTTTTTCCTTGATCAGCTTAATCTTTTATTTCGTAATAAAACATCTGCACCGAAGAGTGGAGAAGGCCCAGAAAACAATAATGTAAAGAGGAATTGA 1536 0.4271 MATKSPDRPAEPPSIATDTPSIAVEAPSTAAETPSTAAETPQTQLQPSTSTPPSAKPLPPTAKPEVPLPESKTSNDPSLILVPSHSRWFSWDSIHECEIRLIPDSSKNPRVYKYYRNSIVKIFRFNPNRKITFTDVRKTLVGDVGSIRRVFDFLEAWGLINYHPSSALSKPFKWEDKESKTDSTSNSTESPSPAPVRETAKRVCSGCKALCAIACFACDKHDMTLCARCFVRGNYRVGMSNSDFKRVEISDETKTEWTEKETLNLLEAITKFGDDWKKVSHNVVGRTEKECVARFLKLPFGDQFLHYQHSVSAPLTDDGSDQLKPSADADCESETVASAKSNKRMRLTPLADASNPIMAQAAFLSALAGTEVAQAAAQAALTSLSDLYKSTRINYRSFPKNTLHQDAGVTSNGGNASNSIEGSLLRANIQCEKEESDVEKAISDIIAVQMKDIQDKVINFEDLDLLMEKERLQLEQVKNLFFLDQLNLLFRNKTSAPKSGEGPENNNVKRN 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03361 511 CDD SANT 256 298 IPR001005 -
Car05g03361 511 Pfam SWIRM-associated region 1 426 489 IPR032451 -
Car05g03361 511 SUPERFAMILY Homeodomain-like 254 303 IPR009057 -
Car05g03361 511 Gene3D - 252 302 - -
Car05g03361 511 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 249 291 IPR017930 -
Car05g03361 511 PANTHER SWI/SNF COMPLEX SUBUNIT SWI3B 18 508 - -
Car05g03361 511 ProSiteProfiles Myb-like domain profile. 249 299 IPR001005 -
Car05g03361 511 PANTHER SWI/SNF COMPLEX-RELATED 18 508 - -
Car05g03361 511 MobiDBLite consensus disorder prediction 52 66 - -
Car05g03361 511 MobiDBLite consensus disorder prediction 1 77 - -
Car05g03361 511 SMART sant 253 301 IPR001005 -
Car05g03361 511 Gene3D - 86 166 IPR036388 -
Car05g03361 511 MobiDBLite consensus disorder prediction 21 51 - -
Car05g03361 511 Pfam SWIRM domain 83 162 IPR007526 GO:0005515
Car05g03361 511 ProSiteProfiles SANT domain profile. 252 303 IPR017884 -
Car05g03361 511 SUPERFAMILY Homeodomain-like 77 172 IPR009057 -
Car05g03361 511 Pfam Myb-like DNA-binding domain 255 298 IPR001005 -
Car05g03361 511 ProSiteProfiles SWIRM domain profile. 80 171 IPR007526 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03361 Car-Chr5 78235778 78238589 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03361 204 295 EF-hand Containing Proteins AT3G07740 31.429 7.20e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03361 K11649 - gmx:100779777 635.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03361 05 78235778 78238589 Car05g03361 05 78235778 78238589 ECH