Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03360 ATGGCATCAATTTCATGGTTCAGCTGTTTACACATTCCACCAACATCCTCTGCTGCCGATAAAGGTTTATCATCATCTCCCATAACCGTGGAACATCATAAAACAACAACACGTTTAATCTCTTCCTTTGAAGGACAACAACATGTTGTTAATAGAAGACAACTGATTCTTTATACATCCACAGCAGCAATTGCAGCACTATCTACTGTCCCAAATGCATTGGCACTAAATGATGTGTCTGAGGATGTTAGTATCTACACTGATGATGAGAACAAGTTCAAGATAGAAATTCCTCAAGAGTGGCAGATAGGAACAGGAGAGTCTGCAGGGTTTAAATCCTTAACTGCTTTCTACCCAAAAGATGAATCTAATTCCAACGTGAGCGTTGTGATCACAGGGGTCGGACCGGATTTCACTAAGATGGAATCATTCGGCAAAGTTGAAGAATTTGCTGACACTCTGGTAAGTGGGCTTGACAGAAGCTGGAAAAGACCCCCTGGTGTGGCTGCTAAACTCATAAATTGTAAATCATCTAAAGGATTTTATTACATTGAGTATACGCTGCAAAATCCCGGCGAGAGTCGCAAGCATCTATATTCAGTTATTGGGATGTCAACAGTTGGCTGGTATAACAGACTGTATACTGTGACAGGACAGTTTGTGGAAGAGGAAACAGAAAAGTATGCTTCCAAAATTTTGAAGGCGGTTGCATCGTTTAAGTTCATATAA 729 0.406 MASISWFSCLHIPPTSSAADKGLSSSPITVEHHKTTTRLISSFEGQQHVVNRRQLILYTSTAAIAALSTVPNALALNDVSEDVSIYTDDENKFKIEIPQEWQIGTGESAGFKSLTAFYPKDESNSNVSVVITGVGPDFTKMESFGKVEEFADTLVSGLDRSWKRPPGVAAKLINCKSSKGFYYIEYTLQNPGESRKHLYSVIGMSTVGWYNRLYTVTGQFVEEETEKYASKILKAVASFKFI 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03360 242 PANTHER - 33 242 - -
Car05g03360 242 PANTHER PSBP DOMAIN-CONTAINING PROTEIN 3, CHLOROPLASTIC 33 242 - -
Car05g03360 242 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 75 241 - -
Car05g03360 242 Pfam PsbP 83 241 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Car05g03360 242 SUPERFAMILY Mog1p/PsbP-like 84 241 IPR016123 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03360 - - lja:Lj1g3v3404330.1 361.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03360 05 78233298 78235003 Car05g03360 05 78233298 78235003 ECH