Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03357 ATGGCTTTTATATCTTTTTCCTCCAAAACACTTGTTCTAGCTTGTTCCTTATGCTTATTTATTTCTTTAGCATTTGCACGTGATTTCTCCATCGTGGGGTATTCATCTGAGGACTTAAAGTCCATGGACAAGCTCATTGAACTCTTCGAATCATGGATGTCGAGACACGGCAAGATTTATGAGACAATTGAGGAAAAACTACTTAGGTTCGAGGTGTTTAAGGATAATCTAAAGCACATTGATGAGAGAAACAAGATTGTTAGCAACTATTGGCTTGGTTTGAATGAGTTTGCTGATTTGAGTCACCAAGAGTTCAAGAACAAGTACCTTGGTCTTAAAGTTGATTTCTCTAAAAGGACAGAGTCTTCACAAGAAGAGGATTTCACTTATAGAGATGTTGATTTGCCAAAGTCTGTGGATTGGAGAAAGAAAGGAGCTGTGACAGCTGTCAAGAATCAAGGACAATGTGGCAGCTGTTGGGCATTTTCCACTGTTGCAGCGGTTGAAGGAATAAACCAAATTGTGACAGGGAATTTGACATCTTTGTCTGAGCAAGAGTTAATTGATTGTGACACAACTTACAACAGTGGTTGCAATGGGGGTCTCATGGATTATGCATTCTCTTTCATAGTACAAAATGGTGGACTCCATAAAGAGGAAGATTATCCTTACATTATGGAAGAAAGCACTTGTGAAATGAAAAAGGAAGAAACTGAAGTTGTTACTATTAATGGATATCATGATGTGCCACAAAATAATGAACAAAGTTTATTGAAGGCACTTGCAAATCAACCCCTTAGTGTTGCCATTGAGGCTTCAGGCAGAGATTTCCAATTTTATAGTGGGGGTGTGTTTGATGGGCATTGTGGAAGTGAGTTAGATCATGGTGTGGCAGCTGTTGGATATGGTACATCAAAAAATTTGGATTATATCATAGTGAAGAATTCATGGGGGGCAAAGTGGGGAGAAAAAGGGTTTATAAGAATGAAGAGAAACATTGGAAAGCCAGAAGGGATTTGTGGACTCTACAAGATGGCTTCTTATCCCACTAAAAAGAAATAA 1062 0.3851 MAFISFSSKTLVLACSLCLFISLAFARDFSIVGYSSEDLKSMDKLIELFESWMSRHGKIYETIEEKLLRFEVFKDNLKHIDERNKIVSNYWLGLNEFADLSHQEFKNKYLGLKVDFSKRTESSQEEDFTYRDVDLPKSVDWRKKGAVTAVKNQGQCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELIDCDTTYNSGCNGGLMDYAFSFIVQNGGLHKEEDYPYIMEESTCEMKKEETEVVTINGYHDVPQNNEQSLLKALANQPLSVAIEASGRDFQFYSGGVFDGHCGSELDHGVAAVGYGTSKNLDYIIVKNSWGAKWGEKGFIRMKRNIGKPEGICGLYKMASYPTKKK 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03357 353 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 25 351 - -
Car05g03357 353 CDD Peptidase_C1A 136 349 IPR039417 -
Car05g03357 353 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 310 329 IPR025661 -
Car05g03357 353 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 293 303 IPR025660 -
Car05g03357 353 PANTHER CYSTEINE PROTEASE XCP1-LIKE 25 351 - -
Car05g03357 353 Gene3D Cysteine proteinases 28 352 - -
Car05g03357 353 Pfam Cathepsin propeptide inhibitor domain (I29) 49 105 IPR013201 -
Car05g03357 353 PRINTS Papain cysteine protease (C1) family signature 153 168 IPR000668 GO:0006508|GO:0008234
Car05g03357 353 PRINTS Papain cysteine protease (C1) family signature 295 305 IPR000668 GO:0006508|GO:0008234
Car05g03357 353 PRINTS Papain cysteine protease (C1) family signature 310 316 IPR000668 GO:0006508|GO:0008234
Car05g03357 353 SMART Inhibitor_I29_2 49 105 IPR013201 -
Car05g03357 353 SMART pept_c1 135 350 IPR000668 GO:0006508|GO:0008234
Car05g03357 353 SUPERFAMILY Cysteine proteinases 44 350 IPR038765 -
Car05g03357 353 Pfam Papain family cysteine protease 135 349 IPR000668 GO:0006508|GO:0008234
Car05g03357 353 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 153 164 IPR000169 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03357 Car-Chr5 78222546 78224291 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03357 K16290 - gmx:100788466 653.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03357 05 78222546 78224291 Car05g03357 05 78222546 78224291 ECH