Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03351 ATGATGACGAGGTTGAATCTGTTTCTCTTTACATTTACCATTCTATCCTCGCATTTGCTCTCCGCCTCCGCCTCCGATCTGATCCTCACCAAGGTTGACCGTCGTATTGATCTGTCGTCGCAAATTGTCCGCACCACTACTACACTCAAGGTGGAGAATACAGGATCTGATATAGTTTCAGAAATCTTGTTGTCCTTTCCTGAGAACCATGTAAATCACTTGGCACACTTGACAGCAACCCTTAATGAAGGAAGGGGAAAGGCGAAAACGTCTTCTGGTGTTGGTTTACCTGTTGAAGTTGTCCACCCTAAAGGCGTTCCCCCTAAATTGACAATTTACTCCGTAACTTTACCTAAAGGCCTTGGGAAGGGAGATAGTTTGACGTTGGATGTCTTGGCCGTTTTTTCCCACATATTGAAACCATTTCCAGAGAAAATTACTCAAGCTGACATCCAGCTTCTGCTGTTTCAAGAGAGTGCATACTATATTTCTCCTTATGCTGTAAAGGTCCAATCACTCACTGTTAAATTACCTGATGCAAGAGTAGAGTCCTACACAAAACTGGAAGATACAAAACTTCAGGGATCTGAATTGAAATATGGTGCATATGAGAATCTTCCTCCATTCTCATACTTGCCAATAGTTATCCACTTTGAGAATAATCAACCCTTTGCCGTTGCTAAAGAGTTGGTGCGGGAGATTGAGATATCCCATTGGGGCAATGTGCAGATCACAGAGCATTATAATCTTGTTCATGGCGGCGCTCAGAGCAAAGGAGAATTTTCAAGGCTTGACTATCAGGCCAGGCCATATGTAAGAGGAGCATCAGCCTTTAGGCGTCTTGTTGCAAAGCTACCCCCAAGAGCTCATTCTGTTTACTACAGGGATGAAATCGGCAACATTTCCACTTCTAGTTTATGGGGTGACTCAAAAAAGACAGAACTGGTGATCGAACCTAGGTACCCAATTTTTGGTGGCTGGAAAACTGCTTTTACCATTGGATATGGGTTGCCACTTAAGGACTTTTTATTTGGATTGGATGGCAAGCGCTTCCTTAATATCTCTTTTGGTTCCCCTATTAATGAGTTGGTGATTGACACTCTTATTGTGAAGGTTGTTTTGCCAGAGGGTTCAAAAGATATTTCAGCATCTGTTCCATTTCCTGTGAAACAAAGACAGGAGACGAAGTTTTCCCACTTGGATATTGCTGGTAGACCTGTTGTTGTGCTGGAGAAGAACGATGCTGTGCCTGAGCATAATGAGCATTTTCAGGTCTATTATAAGTTCAACTGCCTTTCTATGCTTAGGGAGCCATTGATGTTGATTTCCGGGTTTTTCTTTCTATTTGTTGCTTCCATTGTCTACATGCACGCAGACTTGTCAATCTCCAAGTCTTCTGCATCTTATTTGGCAAAGATCCAATGGGAAGAGGTTCAAGCAACTGTTCGTCAGGTCCATAATATCATTAGCCGTTGCTTAACTACACATGACAAGCTAGAAGCATCGTTGCATGATCTTTCTAGGACAGGAGATGTTCAAGCATGTAAAGCAACCCGAAAATCAGTTGATAGTTCGTTGAAAGAGCTCACGAAAGAGTTGAAATCACCAGTGGCATTTTTGCAGTCTTCTCCACAAGCCGCTCAAATATTACCCAAGGTGGAGGAGGTCATTGTTAAGGAGAGAGATTTGCAGGAGAAGCTTATGGCAAAACACTCTACTGTTGTAGACTGTTATGAGAAGAAGTTAGGAGGAAGGGAAATTGAGAATCGGGTTGCCTTACATCACCAGAAAATTGCAGCTTTGAGACTAGAGATTGACGATATTATGGACTTGATTGATGAGATATGA 1848 0.4242 MMTRLNLFLFTFTILSSHLLSASASDLILTKVDRRIDLSSQIVRTTTTLKVENTGSDIVSEILLSFPENHVNHLAHLTATLNEGRGKAKTSSGVGLPVEVVHPKGVPPKLTIYSVTLPKGLGKGDSLTLDVLAVFSHILKPFPEKITQADIQLLLFQESAYYISPYAVKVQSLTVKLPDARVESYTKLEDTKLQGSELKYGAYENLPPFSYLPIVIHFENNQPFAVAKELVREIEISHWGNVQITEHYNLVHGGAQSKGEFSRLDYQARPYVRGASAFRRLVAKLPPRAHSVYYRDEIGNISTSSLWGDSKKTELVIEPRYPIFGGWKTAFTIGYGLPLKDFLFGLDGKRFLNISFGSPINELVIDTLIVKVVLPEGSKDISASVPFPVKQRQETKFSHLDIAGRPVVVLEKNDAVPEHNEHFQVYYKFNCLSMLREPLMLISGFFFLFVASIVYMHADLSISKSSASYLAKIQWEEVQATVRQVHNIISRCLTTHDKLEASLHDLSRTGDVQACKATRKSVDSSLKELTKELKSPVAFLQSSPQAAQILPKVEEVIVKERDLQEKLMAKHSTVVDCYEKKLGGREIENRVALHHQKIAALRLEIDDIMDLIDEI 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03351 615 Coils Coil 598 615 - -
Car05g03351 615 Pfam Ribophorin I 29 455 IPR007676 GO:0006486|GO:0016021
Car05g03351 615 PANTHER RIBOPHORIN I 3 593 IPR007676 GO:0006486|GO:0016021
Car05g03351 615 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 1 3 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03351 Car-Chr5 78176117 78181086 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03351 25 553 Miscellaneous Gene Families AT1G76400 67.297 0.0 750
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03351 K12666 - gmx:100817203 991.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03351 05 78176117 78181086 Car05g03351 05 78176117 78181086 ECH