Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03350 ATGAGTTCTTCTTCATTttgcagttgcagttgcagtagcaattcagtAAGTTGGTTGTTAGTAGAGAAATGTAAAATTGATTACACAAGTTATGCGTTTTCCAATTCTAAGCGAAGAAACATGAGCATGAAACGAAGGGCATTGGCGGTTTCACTTTCTGATGATATTTCTCTATCGAGAAGATCCACCGCGCttcttatttcttctttgcctttcacctttcttttcctctctCCAGCTGAAGCCAGAGACAGACGCAAGAAGAACAACATCCCCATCGACGATTATCTCATTGCCCCTGATGGATTAAAATACTTTGATTTCGTTGAGGGAAAAGGTCCAATTGCTCAAAAAGGTTCAACTGTTCAGGTTCACTTTGATTGTTTGTATCGCGGAATTACAGCCATTTCAAGTCGGGAATCTAAACTCCTTGCTGGAAATCGTGCTATTGCTCAGCCATATGAATTCAAGGTGGGAGCTCAACCTGGAAAGGAAAGGAAGCGCGAATTTGTAGACAACCCAAATGGTTTATTCTCCGCACAAGCAGCACCAAAACCTCCATCGGCAATGTACACAATAGTTGAAGGAATGCGAGTTGGTGGAAAGCGAACTGTGATCGTTCCTCCTGAAAAAGGGTATGGAAAAAAGGGAATGAATGAGATTCCGCCTGGAGCTACATTTGAACTAAATATTGAACTTTTGCAAGTGACATCTACCTGA 720 0.3792 MSSSSFCSCSCSSNSVSWLLVEKCKIDYTSYAFSNSKRRNMSMKRRALAVSLSDDISLSRRSTALLISSLPFTFLFLSPAEARDRRKKNNIPIDDYLIAPDGLKYFDFVEGKGPIAQKGSTVQVHFDCLYRGITAISSRESKLLAGNRAIAQPYEFKVGAQPGKERKREFVDNPNGLFSAQAAPKPPSAMYTIVEGMRVGGKRTVIVPPEKGYGKKGMNEIPPGATFELNIELLQVTST 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03350 239 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 119 237 IPR001179 GO:0003755
Car05g03350 239 SUPERFAMILY FKBP-like 85 236 - -
Car05g03350 239 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 114 234 IPR001179 GO:0003755
Car05g03350 239 Gene3D - 79 239 IPR046357 GO:0003755
Car05g03350 239 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP18, CHLOROPLASTIC 35 238 IPR044180 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03350 Car-Chr5 78173018 78175169 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03350 K01802 - gmx:100527183 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03350 05 78173018 78175169 Car05g03350 05 78173018 78175169 ECH