Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03337 atGACAGCACCGAACATGGATCAGTTCGAAGCTTTTTTCAGAAGAGCAGATTTAGACGGAGATGGAAGAATCAGTGGAGCTGAGGCTGTCAATTTCTTTCAGGGATCCAACTTGCCTAAACACGTTCTCGCTCAGGTATGGATGCATGCTGATCAAGCCAAAACTGGTTTCCTTGGACGAAATGATTTTTATAATGCTTTGAGATTAGTAACTGTTGCACAGAGCAAGCGAGATTTAACGCCTGATATTGTCAAAGCAGCATTATTTGGTCCTGCTTCTGCTAAAATCCCTGCACCGCAAATCAATCTGGCTGCTATACCTCCACAGCGTCCGAATCCGAATCCAGTGGCTGCCTCATCTGTTGGGCAGATGGGTGCAACTGCACCCACATCGACTCAAAGTTTTGCCTATAGAGGACAGGGGTTAACAGGTTCTGCTGGGAATCAACAATATCTTCCTTCCCAGCAGAATCCTACCATGAGACCACCTCAATCACAGGGTTTTGCAGGTTCTGTTGCGAACCAACAGTATCTTCCTTCCCAGCAGAATCCTAACACGAGACCGCCTCAATCACAGGGTTTTGCAGGTTCTGTTGCGAACCAACAGTATCTTCCTTCCCAGCAGAATCCTAACACGAGACCGCCTCAATCACAGGGTTTTGCAGGTTCTGTTGCGAACCAACAGTATCTTCCTTCCCAGCAGAATCCTAACACGAGACCGCCTCAATCACAGGGGTTTACAGGATCTGTTCCAAATCCGCAGTACCTTCCTTCCCAGCAGAGCCCAACAATGAGACCACCTCAATCATTGGGGTTAGGAGGTTCTGTTGCAAACCAACAATATTTTCCTTCCCAGCAGAGTCCAACCATGAGGCCACCTCAATCCATGCCTGCTGGTAGCGTTTCTGGTCCACCACAATTCATGCCTGCTGGTAGCACTCCTCGTCCAACTCAATCGACGCCCGCTGGTACAGCCCCCCGTCTGCAACAGGGTTTTGCAGGTCCCAACCTCTCAAATCCTAGCATCTCAAATGAATGGAATAGTGGAAGGACTGGTATGGCTCCTCTTAGACCTGCAGGAACAACTCAATCAGTTGCCTTATCAACACCAACGTCGGCATCTCCGGTCTCTCCAATGTCCCAGCCAACAGCTATTACCAATAATAAAGCATTGGCTGGAAATGGGTACCCTTCTAATTCAGTTTTGAGCAGCGATTTCTTCTCTGTTGCCTCATCCACACCGAAACAAGATCCTACTCGACAGAATTATCCTGTTAGCAGCCCACCTGCCTCATCAGCCACTGTTCCAGTTTCCAGTAGTACCAACCCTGCAAGTAGACAAAGTTCACTTGATTCATTGCAGAGTGCATTCTCAATGTCGCTTACAAATAGTCAGATTCCGCGGACACATTCTTTACCAAACACAAGCCAGCAAATTTCACCACCTGCTTCTTCTCCGCTTTCCACATCTGGGAGGTCGGTTGGACTTGGAAATACTAGTTCTGACAATTCACAACCTCCATGGCCAAAAATGAAACCTTCTGATGTGCAGAAGTATACAAAAGTGTTTATGGAAGTTGACACCGACAGGGATGGAAAAATCACTGGGGAGCAGGCACGCAGTCTATTTTTAAGTTGGAGATTGCCAATAGATGTCTTAAAGAGGGTGTGGGACTTATCTGACCAGGATAATGATAGCATGCTTTCCTTGAAGGAGTTTTGTTTTGCTCTTTATTTGATGGAGCGGTACAGGGAAGGTCGTCCTCTTCCACAGTCTCTTCCAAGTAATGTTATATTTGACGAAACATTGATGTCTATGACGGGGCAACCAAAAATCACTTACGGAAATGCAGCATGGGGTGTAGGCCCAGGTTTTCAGCAGCAACAAGGGATGCCAGGCACTCGGCAAGTGGCACCAGAAGCTGGTTTGAGGCCGCCAGTGCAAGAAGCGCCTGCTCGGGCTGATGGCACTGTGCTGCCTGATCAGAAAAAATTTGGAACTTCTGTGTTGGATGATTCCTTTTTGAATGACACAGATAATAGTGAACAAAATATTGAGACTGCAGGGAAAAAGGCTGAAGAAACTCAGAATCTGATATTGGATTCAAAAGAGAAGATTGAGTTGTACCGCAACAAAATGCAGGAATTGGTCCTGTATAAAAGCAGATGTGATAACCGTCTAAATGAGATTACAGAAAGGGCATCTGCAGATAAGCGTGAGGCAGAATCTTTGGGCAAGAAATATGAAGAGAAATACAAACAAGTTGCAGAAATAGCATCCAAATTGACTGTAGAAGAAGCAAAATTTCGTGATATACAGGAAAGGAAGGTGGAGTTGCAGCAAGCCATCGTCAAAATGGAACAAGGAGGTAGTGCAGATGGTATTCTTCAGGTTCGTGCTGATCGCATACAGTCAGATCTTGAGCAGTTATTTAGGGGTCTTACTGAACGGTGCAAGAAACATGGGATAGATGTGAAGTCAATTGCAATGGTTCAGCTTCCAGATGGTTGGCAACCCGGAAATCCAGAGGGGGCTGCTGTTTGGGACGAAGATTGGGATAAATTTGAAGATGAAGGATTTGCCAATGATCTCACTTTTGATACGAAAAATGCATCTTCAAAGCCAAAACCTGCATTCATTCCAGGAGAACAAAATTTTGTTGATGATAACTCAGTTAATGGTTCACCTGTGAATGCAAATGGGAAGCAAGAAATTTTTACTAATGGTGATTATACAGTAGAGGAGGAATCTTCTTATGCACAGAATGAAGATTACTTGGCAAGAAGCCCTCGTGATAGCCCAGCTGGGAGGACTACAGTGGACAGTCCTTCTAAAGAGTTTTCAACTGCTCATTTTGTAGAAAGTTCTGAAGCAGATGCAGAAACACATAGAAGTTTTGATGAATCAACCTGGGGAGCATTTGACAATAATGATGATGTGGACTCGGTGTGGGGTTTTAACACCAAGGACTCTGACTTGGAGAAGCAGGAAGATTTCTTTAAATCTGATGATTTTGGTCTAAACCCAGTTAGAACAGGATCTACACATACAGATGGCGTGTTCCAGACAAAAAGCCCATTTGCTTTTGATGATTCCGTGCCTGGAACTCCACTTTCTAAGTTTGGCAACTCTCCAAGGTACAGCGAAGCAGGGGATCACTTCTTTGACACGTCACGGTTTGATTCCTCCTTCAGCATGCACGAAAGTGCAAATTCTCCACAAGCAGAGAAGTTTACAAGATTTGATTCCATAAGTAGCAGCAGGGATTTTGGCTACAATCAGGAGAAGTTTTCAAGGTTTGATTCCATAAGTAGCAGCAAGGATTTTGGCTACAATCACGAGAAATTTTCAAGGTTTGATTCTATTAATAGCAGCAAAGATTTTGGCTACAATCCTGAGAAGCTCACAAGGTTTGATTCCATGAGTAGCAGCAAAGATTTTGGCTTCGGTAGTCAGGGACATGCAAGGTTTGACTCAATTAGCAGCACCAAGGACTTAGGCTATAGTGCTCCATTCTCTTTCGATGACTCTGATCCATTCGGCTCCTCTGGTCCATTTAAGGTCACTTCAGAGAATCATTCTCCAAAGAAAGGCTCTGATAATTGGAGTGCGTTCTAG 3618 0.4483 MTAPNMDQFEAFFRRADLDGDGRISGAEAVNFFQGSNLPKHVLAQVWMHADQAKTGFLGRNDFYNALRLVTVAQSKRDLTPDIVKAALFGPASAKIPAPQINLAAIPPQRPNPNPVAASSVGQMGATAPTSTQSFAYRGQGLTGSAGNQQYLPSQQNPTMRPPQSQGFAGSVANQQYLPSQQNPNTRPPQSQGFAGSVANQQYLPSQQNPNTRPPQSQGFAGSVANQQYLPSQQNPNTRPPQSQGFTGSVPNPQYLPSQQSPTMRPPQSLGLGGSVANQQYFPSQQSPTMRPPQSMPAGSVSGPPQFMPAGSTPRPTQSTPAGTAPRLQQGFAGPNLSNPSISNEWNSGRTGMAPLRPAGTTQSVALSTPTSASPVSPMSQPTAITNNKALAGNGYPSNSVLSSDFFSVASSTPKQDPTRQNYPVSSPPASSATVPVSSSTNPASRQSSLDSLQSAFSMSLTNSQIPRTHSLPNTSQQISPPASSPLSTSGRSVGLGNTSSDNSQPPWPKMKPSDVQKYTKVFMEVDTDRDGKITGEQARSLFLSWRLPIDVLKRVWDLSDQDNDSMLSLKEFCFALYLMERYREGRPLPQSLPSNVIFDETLMSMTGQPKITYGNAAWGVGPGFQQQQGMPGTRQVAPEAGLRPPVQEAPARADGTVLPDQKKFGTSVLDDSFLNDTDNSEQNIETAGKKAEETQNLILDSKEKIELYRNKMQELVLYKSRCDNRLNEITERASADKREAESLGKKYEEKYKQVAEIASKLTVEEAKFRDIQERKVELQQAIVKMEQGGSADGILQVRADRIQSDLEQLFRGLTERCKKHGIDVKSIAMVQLPDGWQPGNPEGAAVWDEDWDKFEDEGFANDLTFDTKNASSKPKPAFIPGEQNFVDDNSVNGSPVNANGKQEIFTNGDYTVEEESSYAQNEDYLARSPRDSPAGRTTVDSPSKEFSTAHFVESSEADAETHRSFDESTWGAFDNNDDVDSVWGFNTKDSDLEKQEDFFKSDDFGLNPVRTGSTHTDGVFQTKSPFAFDDSVPGTPLSKFGNSPRYSEAGDHFFDTSRFDSSFSMHESANSPQAEKFTRFDSISSSRDFGYNQEKFSRFDSISSSKDFGYNHEKFSRFDSINSSKDFGYNPEKLTRFDSMSSSKDFGFGSQGHARFDSISSTKDLGYSAPFSFDDSDPFGSSGPFKVTSENHSPKKGSDNWSAF 1205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03337 1205 MobiDBLite consensus disorder prediction 230 296 - -
Car05g03337 1205 ProSiteProfiles EF-hand calcium-binding domain profile. 548 583 IPR002048 GO:0005509
Car05g03337 1205 PANTHER CALCIUM-BINDING EF HAND FAMILY PROTEIN 1134 1205 - -
Car05g03337 1205 PANTHER CALCIUM-BINDING EF HAND FAMILY PROTEIN 1 188 - -
Car05g03337 1205 PANTHER CALCIUM-BINDING EF HAND FAMILY PROTEIN 256 1101 - -
Car05g03337 1205 SMART eh_3 1 93 IPR000261 GO:0005515
Car05g03337 1205 SMART eh_3 508 603 IPR000261 GO:0005515
Car05g03337 1205 MobiDBLite consensus disorder prediction 465 510 - -
Car05g03337 1205 Gene3D - 3 100 - -
Car05g03337 1205 MobiDBLite consensus disorder prediction 1183 1205 - -
Car05g03337 1205 SUPERFAMILY EF-hand 2 83 IPR011992 -
Car05g03337 1205 Coils Coil 692 712 - -
Car05g03337 1205 PANTHER EH DOMAIN 1134 1205 - -
Car05g03337 1205 PANTHER EH DOMAIN 256 1101 - -
Car05g03337 1205 PANTHER EH DOMAIN 1 188 - -
Car05g03337 1205 MobiDBLite consensus disorder prediction 312 350 - -
Car05g03337 1205 Coils Coil 762 782 - -
Car05g03337 1205 SMART efh_1 552 580 IPR002048 GO:0005509
Car05g03337 1205 SMART efh_1 518 546 IPR002048 GO:0005509
Car05g03337 1205 SMART efh_1 42 70 IPR002048 GO:0005509
Car05g03337 1205 SMART efh_1 8 36 IPR002048 GO:0005509
Car05g03337 1205 MobiDBLite consensus disorder prediction 357 391 - -
Car05g03337 1205 CDD EH 519 585 IPR000261 GO:0005515
Car05g03337 1205 CDD EH 9 75 IPR000261 GO:0005515
Car05g03337 1205 MobiDBLite consensus disorder prediction 918 964 - -
Car05g03337 1205 MobiDBLite consensus disorder prediction 230 391 - -
Car05g03337 1205 MobiDBLite consensus disorder prediction 409 452 - -
Car05g03337 1205 Pfam EF hand 10 26 IPR002048 GO:0005509
Car05g03337 1205 Gene3D - 492 599 - -
Car05g03337 1205 MobiDBLite consensus disorder prediction 105 169 - -
Car05g03337 1205 Pfam Cytoskeletal-regulatory complex EF hand 509 597 IPR000261 GO:0005515
Car05g03337 1205 MobiDBLite consensus disorder prediction 935 951 - -
Car05g03337 1205 ProSiteProfiles EH domain profile. 5 95 IPR000261 GO:0005515
Car05g03337 1205 MobiDBLite consensus disorder prediction 115 169 - -
Car05g03337 1205 MobiDBLite consensus disorder prediction 465 514 - -
Car05g03337 1205 ProSiteProfiles EH domain profile. 515 598 IPR000261 GO:0005515
Car05g03337 1205 ProSiteProfiles EF-hand calcium-binding domain profile. 4 39 IPR002048 GO:0005509
Car05g03337 1205 SUPERFAMILY EF-hand 503 598 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03337 Car-Chr5 78087112 78098301 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03337 4 216 EF-hand Containing Proteins AT1G20760 53.521 9.91e-51 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03337 K12472 - cam:101508239 2389.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03337 05 78087112 78098301 Car05g03337 05 78087112 78098301 ECH