Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03329 ATGGGCGATGTATCTGAAAGTAATACCATGATGATCACGAAGAAGAAGAAGAAGGGTCGTCCATCTCTTTTGGATCTTCAAAAACGATCTCTCAAAAAACAACAACATCACAAAACCCCCAATTTATTCATCGATCCCTCTTCTTATTCCAACAACGACGACGACGATGAACGCAAACTCAAGAAACAAAAACTCTTACTCGGTTTGaatttgaattccaattccaattcccttctccataacaactccacattattccccaattccaattccaattccgatcccCAAACCGCTCAATTTCACCCTATCCACAACGGATCAAACCAAAACGATGGAAAGGTTCCGAAAGCGACTGACAGTAAACATGGTTTGCAGGGTGTGTCCGGTCCCACTACACCTTTGCCAGACAAAAAGCTCTTGCTGTTTATCCTTGACAGACTTCAAAAAAAGGACACACATGGGGTATTCTCTGAGCCGGTGGATCCAGAAGAGCTCCCTGATTATCATGATATCATTAAAAACCCCATGGATTTTGGAACTATAAGGAAGAAATTGGATGGGGGACTATATATCACCTTTGAGCAGTTTGAGAACGACGTGTTCTTGGTATGCTCTAATGCAATGCAATACAATTCAGCAGATACTATTTACTATAGACAGGCCCGAGCCATGCAAGAGATTGCAAGGAAGGACTTTGAGAATCTGAGACAAGatagtgacgacgacgacgacgatgatagtgaaccaccacaACCTAAAATTGTGCAAAGGGGAAGGCCACCAGGCAAGCACGCAAAAAAGTCATTGGGCATGTCTCCATCAGAGCTTGTTGCTCCTGAATCTTCCTCCGATGCAACTCTTGCTTCTGGTGGGGATATTGCTAGTGGCTCCAACGGTTATAATCTAAGAAAAGTAGTGAGCAAATTTCAGCCTACAGATTCATCAGCCAGGGCTCCCCAAATCAACAGTGGGGGTTATACTAGTTGGTCGTCTGAATGGGAGAATGAATTTCCACCTTCTGTTTTAAAAGCTGTGTTAAGATATGGAAAGAAGCAATTCACAGTTGATGAGACAAGGCGCGACACTTACAGAAATCCAGTGGCTGTAGGAAATGAACCACCAGTATTGGCCGCATTTGAAGATAATTTCAAGCAACTTCTTGCAGTTGGTTTACATGTGAATCACAGTTATGCGAGAAGCCTAGCCCATTTTGCTGCAGACCTTGGTCCTGTTGTTTGGAAGGTTGCTGCTAAGAAAATCGGCAGTGTTTTGCCACCAGGACATGAGTTTGGTCCTGGATGGGTAGCTGATGATGATGTGTCACAGAGGCAACACTTCGCAGTTCCTGATGAGCGAAGTTTGGACCCTCCTGTACCAGAGGATTATAAAAGTAGATTTTCTTCTCCATCCAGAATGTTCTCTCTTGCAAATACATCACGCTCGCAAAGTGGAGACATGATGGTAAGACTTGCTGACTTAACCGGGTCTTCAAACGCCGGTAATGTTCCTCAAATGTTCGATATGGATACCATAAACAGCCTTTCTGGCCATATTGCGCCTACAAATATTAATCCAACAGCTCTCAAGGCCCAATTCTTCAACAAGTCAAGTCAATCAGATTCCAGTAATTTATCAGGTCTGGAATCTGGATTTGATTTGCAAAGATTGTCTCAAGGGCTTGCCCCCGGAAAATCATCTTGGCAAGGATTGGAAGTTCCTACCAAACAGAATTCTTTTTCACTTGGTAATGACTTAAACGGAATGATAGGCGCAACAAGTTCACGCAGCTCCAATGTGGAGACTGGTCCTCAGCTGCAGCCAAATCTTGCATTGCAGCTCTGA 1842 0.4093 MGDVSESNTMMITKKKKKGRPSLLDLQKRSLKKQQHHKTPNLFIDPSSYSNNDDDDERKLKKQKLLLGLNLNSNSNSLLHNNSTLFPNSNSNSDPQTAQFHPIHNGSNQNDGKVPKATDSKHGLQGVSGPTTPLPDKKLLLFILDRLQKKDTHGVFSEPVDPEELPDYHDIIKNPMDFGTIRKKLDGGLYITFEQFENDVFLVCSNAMQYNSADTIYYRQARAMQEIARKDFENLRQDSDDDDDDDSEPPQPKIVQRGRPPGKHAKKSLGMSPSELVAPESSSDATLASGGDIASGSNGYNLRKVVSKFQPTDSSARAPQINSGGYTSWSSEWENEFPPSVLKAVLRYGKKQFTVDETRRDTYRNPVAVGNEPPVLAAFEDNFKQLLAVGLHVNHSYARSLAHFAADLGPVVWKVAAKKIGSVLPPGHEFGPGWVADDDVSQRQHFAVPDERSLDPPVPEDYKSRFSSPSRMFSLANTSRSQSGDMMVRLADLTGSSNAGNVPQMFDMDTINSLSGHIAPTNINPTALKAQFFNKSSQSDSSNLSGLESGFDLQRLSQGLAPGKSSWQGLEVPTKQNSFSLGNDLNGMIGATSSRSSNVETGPQLQPNLALQL 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03329 613 MobiDBLite consensus disorder prediction 1 57 - -
Car05g03329 613 ProSitePatterns Bromodomain signature. 153 210 IPR018359 -
Car05g03329 613 MobiDBLite consensus disorder prediction 575 613 - -
Car05g03329 613 MobiDBLite consensus disorder prediction 236 293 - -
Car05g03329 613 SMART bromo_6 129 237 IPR001487 GO:0005515
Car05g03329 613 PANTHER BROMODOMAIN CONTAINING PROTEIN 10 486 - -
Car05g03329 613 MobiDBLite consensus disorder prediction 80 114 - -
Car05g03329 613 ProSiteProfiles Bromodomain profile. 148 218 IPR001487 GO:0005515
Car05g03329 613 Pfam Bromodomain 143 222 IPR001487 GO:0005515
Car05g03329 613 MobiDBLite consensus disorder prediction 10 30 - -
Car05g03329 613 PRINTS Bromodomain signature 151 164 IPR001487 GO:0005515
Car05g03329 613 PRINTS Bromodomain signature 165 181 IPR001487 GO:0005515
Car05g03329 613 PRINTS Bromodomain signature 199 218 IPR001487 GO:0005515
Car05g03329 613 PRINTS Bromodomain signature 181 199 IPR001487 GO:0005515
Car05g03329 613 PANTHER BROMODOMAIN-CONTAINING PROTEIN-RELATED 10 486 - -
Car05g03329 613 Gene3D - 134 249 IPR036427 GO:0005515
Car05g03329 613 MobiDBLite consensus disorder prediction 80 130 - -
Car05g03329 613 CDD Bromodomain 136 232 - -
Car05g03329 613 MobiDBLite consensus disorder prediction 275 293 - -
Car05g03329 613 SUPERFAMILY Bromodomain 130 242 IPR036427 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03329 Car-Chr5 78023831 78028324 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03329 K22184 - gmx:100783010 748.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03329 05 78023831 78028324 Car05g03329 05 78023831 78028324 ECH